C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: four and a half LIM domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023092 Fhl1 10090 + X:56731787-56793346 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023854 Fhl1-001 56731787-56793346 protein_coding
  ENSMUST00000114768 Fhl1-005 56779730-56792588 protein_coding
  ENSMUST00000114769 Fhl1-002 56731865-56793338 protein_coding
  ENSMUST00000114772 Fhl1-004 56779723-56793340 protein_coding
  ENSMUST00000114773 Fhl1-006 56779437-56793340 protein_coding
  ENSMUST00000116596 Fhl1-003 56732129-56792235 protein_coding
  ENSMUST00000144600 Fhl1-008 56786527-56790666 protein_coding
  ENSMUST00000151033 Fhl1-009 56787725-56789255 protein_coding
  ENSMUST00000153401 Fhl1-010 56787998-56789743 processed_transcript
  ENSMUST00000155882 Fhl1-007 56779819-56789205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023854ENSMUST00000114768ENSMUST00000114769ENSMUST00000114772ENSMUST00000116596ENSMUST00000144600ENSMUST00000151033ENSMUST00000153401
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023854 98.270±14.24 8.069±3.77 133.433±39.46 31.086±21.27 17.152±2.47 84.184±27.48 50.759±5.23 67.172±7.98 5.801±3.65 374.547±32.93 N/A 71.368±26.53 18.569±25.42 5.976±0.32
ENSMUST00000114768 N/A N/A N/A N/A N/A 100.752±18.33 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114769 N/A 2.493±0.34 N/A 17.819±1.60 N/A N/A N/A N/A N/A N/A N/A 5.631±0.00 0.925±0.00 N/A
ENSMUST00000114772 N/A N/A 470.029±74.36 N/A 223.485±24.31 99.294±33.23 12.295±0.00 14.508±0.00 2.551±0.00 N/A 292.836±60.04 10.789±0.00 N/A 0.396±0.00
ENSMUST00000116596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.529±0.00 N/A N/A
ENSMUST00000144600 118.562±2.41 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.171±0.00 N/A N/A
ENSMUST00000151033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 250.848±28.03 N/A N/A
ENSMUST00000153401 N/A 10.464±0.57 N/A 21.796±0.00 N/A N/A N/A N/A 1.432±0.00 N/A N/A 58.355±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PQ CIL_0000PQ_0004 CGP X:56609757-56793346
CIL_0000PP CIL_0000PP_0003 CGP X:56731787-56822326

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003254 IEA regulation of membrane depolarization
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0007275 IEA multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0010972 IEA negative regulation of G2/M transition of mitotic cell cycle
GO:0030154 IEA cell differentiation
GO:0030308 IEA negative regulation of cell growth
GO:0043268 IEA positive regulation of potassium ion transport
GO:0044325 IEA ion channel binding
GO:1901016 IEA regulation of potassium ion transmembrane transporter activity
GO:2000134 IEA negative regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056653 fhl1b four and a half LIM domains 1b protein_coding Danio_rerio
ENSDARG00000071498 fhl1a four and a half LIM domains 1a protein_coding Danio_rerio
ENSG00000022267 FHL1 four and a half LIM domains 1 protein_coding Homo_sapiens

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