C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000PQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009209-ENSDARG00000071498 CGP 7955 14:32488861-32538377
GeneTranscriptPositionBiotype
ENSDARG00000009209 (slc9a6a)
solute carrier family 9 (sodium/hydrogen exchanger), member 6a 		ENSDART00000026195 (slc9a6a-001) 32488861-32512416 protein_coding
ENSDART00000145599 (slc9a6a-002) 32504200-32511723 processed_transcript
ENSDARG00000071498 (fhl1a)
four and a half LIM domains 1a 		ENSDART00000105767 (fhl1a-001) 32527291-32538377 protein_coding
CIL_0000PQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075382-ENSDARG00000056653 CGP 7955 10:27205604-27256439
GeneTranscriptPositionBiotype
ENSDARG00000056653 (fhl1b)
four and a half LIM domains 1b 		ENSDART00000079187 (fhl1b-201) 27233377-27256434 protein_coding
ENSDART00000134322 (fhl1b-001) 27247814-27256439 protein_coding
ENSDART00000138474 (fhl1b-002) 27247814-27253098 retained_intron
ENSDARG00000075382 (slc9a6b)
solute carrier family 9 (sodium/hydrogen exchanger), member 6b 		ENSDART00000112956 (slc9a6b-201) 27205604-27232313 protein_coding
ENSDART00000148617 (slc9a6b-001) 27205604-27223516 protein_coding
CIL_0000PQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198689-ENSG00000022267 CGP 9606 X:135985439-136211359
GeneTranscriptPositionBiotype
ENSG00000022267 (FHL1)
four and a half LIM domains 1 		ENST00000345434 (FHL1-002) 136169926-136211359 protein_coding
ENST00000370674 (FHL1-007) 136204721-136209954 protein_coding
ENST00000370676 (FHL1-003) 136197026-136210067 protein_coding
ENST00000370683 (FHL1-004) 136196773-136211359 protein_coding
ENST00000370690 (FHL1-001) 136147465-136211359 protein_coding
ENST00000394153 (FHL1-201) 136169637-136211359 protein_coding
ENST00000394155 (FHL1-202) 136147400-136211359 protein_coding
ENST00000420362 (FHL1-006) 136147666-136208566 protein_coding
ENST00000434885 (FHL1-010) 136168194-136208575 protein_coding
ENST00000449474 (FHL1-013) 136169891-136207883 protein_coding
ENST00000452016 (FHL1-008) 136167004-136208575 protein_coding
ENST00000456445 (FHL1-012) 136169676-136208570 protein_coding
ENST00000458357 (FHL1-011) 136148111-136207925 protein_coding
ENST00000477080 (FHL1-009) 136204909-136207661 processed_transcript
ENST00000477204 (FHL1-005) 136197063-136207551 processed_transcript
ENST00000535737 (FHL1-203) 136148578-136211359 protein_coding
ENST00000539015 (FHL1-204) 136196754-136211359 protein_coding
ENST00000543669 (FHL1-205) 136169296-136211359 protein_coding
ENST00000618438 (FHL1-206) 136147400-136211359 protein_coding
ENSG00000198689 (SLC9A6)
solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6 		ENST00000370695 (SLC9A6-002) 135985468-136047264 protein_coding
ENST00000370698 (SLC9A6-001) 135985468-136047264 protein_coding
ENST00000370701 (SLC9A6-003) 135985439-136047139 protein_coding
ENSG00000219930 (GAPDHP67)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 67 		ENST00000422905 (GAPDHP67-001) 136077844-136078631 processed_pseudogene
ENSG00000231513 (RP11-274K13.5)
 ENST00000468625 (RP11-274K13.5-001) 136097835-136098348 processed_pseudogene
ENSG00000276558 (AL732579.1)
 ENST00000614761 (AL732579.1-201) 136008483-136008573 miRNA
CIL_0000PQ_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060681-ENSMUSG00000023092 CGP 10090 X:56609757-56793346
GeneTranscriptPositionBiotype
ENSMUSG00000023092 (Fhl1)
four and a half LIM domains 1 		ENSMUST00000023854 (Fhl1-001) 56731787-56793346 protein_coding
ENSMUST00000114768 (Fhl1-005) 56779730-56792588 protein_coding
ENSMUST00000114769 (Fhl1-002) 56731865-56793338 protein_coding
ENSMUST00000114772 (Fhl1-004) 56779723-56793340 protein_coding
ENSMUST00000114773 (Fhl1-006) 56779437-56793340 protein_coding
ENSMUST00000116596 (Fhl1-003) 56732129-56792235 protein_coding
ENSMUST00000144600 (Fhl1-008) 56786527-56790666 protein_coding
ENSMUST00000151033 (Fhl1-009) 56787725-56789255 protein_coding
ENSMUST00000153401 (Fhl1-010) 56787998-56789743 processed_transcript
ENSMUST00000155882 (Fhl1-007) 56779819-56789205 protein_coding
ENSMUSG00000060681 (Slc9a6)
solute carrier family 9 (sodium/hydrogen exchanger), member 6 		ENSMUST00000077741 (Slc9a6-001) 56609854-56664230 protein_coding
ENSMUST00000114784 (Slc9a6-002) 56609856-56663841 protein_coding
ENSMUST00000144068 (Slc9a6-003) 56609757-56633579 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PQ_0001ENSDARG00000009209ENSDART00000026195ENSDART00000145599ENSDARG00000071498ENSDART00000105767CIL_0000PQ_0002ENSDARG00000056653ENSDART00000079187ENSDART00000134322ENSDART00000138474ENSDARG00000075382ENSDART00000112956ENSDART00000148617CIL_0000PQ_0003ENSG00000022267ENST00000345434ENST00000370674ENST00000370676ENST00000370683ENST00000370690ENST00000394153ENST00000394155ENST00000420362ENST00000434885ENST00000449474ENST00000452016ENST00000456445ENST00000458357ENST00000477080ENST00000477204ENST00000535737ENST00000539015ENST00000543669ENST00000618438ENSG00000198689ENST00000370695ENST00000370698ENST00000370701ENSG00000219930ENST00000422905ENSG00000231513ENST00000468625ENSG00000276558ENST00000614761CIL_0000PQ_0004ENSMUSG00000023092ENSMUST00000023854ENSMUST00000114768ENSMUST00000114769ENSMUST00000114772ENSMUST00000114773ENSMUST00000116596ENSMUST00000144600ENSMUST00000151033ENSMUST00000153401ENSMUST00000155882ENSMUSG00000060681ENSMUST00000077741ENSMUST00000114784ENSMUST00000144068
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PQ_0001ENSDARG00000009209ENSDART00000026195ENSDARG00000071498ENSDART00000105767CIL_0000PQ_0002ENSDARG00000056653ENSDART00000079187ENSDART00000134322ENSDART00000138474ENSDARG00000075382ENSDART00000112956ENSDART00000148617CIL_0000PQ_0003ENSG00000022267ENST00000345434ENST00000370676ENST00000370683ENST00000370690ENST00000394155ENST00000449474ENST00000458357ENST00000539015ENST00000618438ENSG00000198689ENST00000370695ENST00000370698ENST00000370701ENSG00000219930ENST00000422905ENSG00000231513ENST00000468625ENSG00000276558ENST00000614761CIL_0000PQ_0004ENSMUSG00000023092ENSMUST00000023854ENSMUST00000114768ENSMUST00000114769ENSMUST00000114772ENSMUST00000116596ENSMUST00000144600ENSMUST00000151033ENSMUST00000153401ENSMUSG00000060681ENSMUST00000077741ENSMUST00000114784ENSMUST00000144068
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009209 ENSDART00000026195 N/A N/A N/A 1.519±0.97 N/A N/A 2.502±0.15 1.501±0.00 0.738±0.00 N/A 0.876±0.00 N/A N/A N/A
ENSDART00000145599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000071498 ENSDART00000105767 N/A N/A N/A 1.386±0.75 N/A N/A 799.998±479.35 61.321±41.55 0.667±0.00 N/A 12.904±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056653 ENSDART00000079187 N/A N/A N/A 0.883±0.00 N/A N/A 34.090±15.06 N/A 0.744±0.00 N/A 1.160±0.00 N/A N/A N/A
ENSDART00000134322 N/A N/A N/A 2.394±0.31 N/A N/A 7.296±4.20 21.299±9.18 1.718±0.00 N/A N/A N/A N/A N/A
ENSDART00000138474 N/A N/A N/A 0.703±0.00 N/A N/A N/A N/A 1.226±0.00 N/A N/A N/A N/A N/A
ENSDARG00000075382 ENSDART00000112956 N/A N/A N/A 11.513±7.81 N/A N/A 2.082±1.14 0.424±0.18 0.100±0.00 N/A 4.228±0.00 N/A N/A N/A
ENSDART00000148617 N/A N/A N/A N/A N/A N/A 0.570±0.00 0.460±0.00 0.118±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000022267 ENST00000345434 N/A N/A N/A 13.792±10.16 N/A N/A N/A N/A N/A 3.661±0.00 N/A 7.618±0.00 N/A 5.563±0.00
ENST00000370674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370676 N/A N/A N/A N/A 13.525±0.00 N/A 36.666±0.00 N/A 48.747±0.00 N/A 883.236±68.85 N/A N/A N/A
ENST00000370683 N/A N/A 1.372±0.00 N/A 17.611±0.00 20.828±0.00 22.087±0.00 N/A 64.392±0.00 10.447±0.00 720.700±0.00 N/A N/A N/A
ENST00000370690 73.124±0.00 51.292±0.00 N/A 11.171±6.61 108.221±100.08 214.592±0.00 242.975±0.00 22.353±0.00 6.163±0.00 108.273±100.02 N/A 23.183±13.09 14.562±5.47 46.582±24.42
ENST00000394153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394155 N/A N/A N/A 2.843±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449474 N/A N/A N/A N/A N/A N/A N/A 3.255±0.00 N/A N/A N/A N/A N/A N/A
ENST00000452016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.022±0.00 20.994±0.00 38.201±0.00
ENST00000477080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539015 77.772±0.00 N/A N/A N/A 136.338±0.00 N/A N/A N/A N/A N/A 1246.110±0.00 6.720±0.90 N/A N/A
ENST00000543669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618438 N/A N/A 1.502±0.00 N/A N/A N/A N/A 2.484±0.00 N/A N/A N/A 1.034±0.00 N/A N/A
ENSG00000198689 ENST00000370695 N/A N/A N/A 9.782±0.00 N/A 1.925±0.00 N/A N/A 1.097±0.00 N/A N/A 0.635±0.12 N/A N/A
ENST00000370698 N/A 3.727±0.00 1.414±0.00 8.193±0.00 1.564±0.00 1.809±0.00 0.917±0.00 0.665±0.00 N/A 3.194±0.00 N/A 1.260±0.33 0.896±0.00 1.562±0.67
ENST00000370701 2.726±0.00 N/A N/A 12.844±6.00 2.462±0.32 2.438±0.00 2.888±1.33 2.405±1.05 0.951±0.00 0.530±0.00 3.015±2.31 2.116±1.06 0.889±0.22 1.893±0.55
ENSG00000219930 ENST00000422905 0.097±0.00 0.040±0.00 N/A 0.065±0.00 0.021±0.00 0.057±0.00 0.071±0.00 0.120±0.00 0.034±0.00 0.036±0.00 0.217±0.00 N/A N/A 0.055±0.00
ENSG00000231513 ENST00000468625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 0.424±0.11
ENSG00000276558 ENST00000614761 N/A N/A N/A N/A 1.215±0.00 N/A N/A N/A 0.355±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023092 ENSMUST00000023854 98.270±14.24 8.069±3.77 133.433±39.46 31.086±21.27 17.152±2.47 84.184±27.48 50.759±5.23 67.172±7.98 5.801±3.65 374.547±32.93 N/A 71.368±26.53 18.569±25.42 5.976±0.32
ENSMUST00000114768 N/A N/A N/A N/A N/A 100.752±18.33 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114769 N/A 2.493±0.34 N/A 17.819±1.60 N/A N/A N/A N/A N/A N/A N/A 5.631±0.00 0.925±0.00 N/A
ENSMUST00000114772 N/A N/A 470.029±74.36 N/A 223.485±24.31 99.294±33.23 12.295±0.00 14.508±0.00 2.551±0.00 N/A 292.836±60.04 10.789±0.00 N/A 0.396±0.00
ENSMUST00000114773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000116596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.529±0.00 N/A N/A
ENSMUST00000144600 118.562±2.41 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.171±0.00 N/A N/A
ENSMUST00000151033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 250.848±28.03 N/A N/A
ENSMUST00000153401 N/A 10.464±0.57 N/A 21.796±0.00 N/A N/A N/A N/A 1.432±0.00 N/A N/A 58.355±0.00 N/A N/A
ENSMUST00000155882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060681 ENSMUST00000077741 1.278±0.01 1.996±0.00 1.653±0.53 6.292±0.14 1.894±0.00 1.264±0.52 0.545±0.00 1.496±0.00 0.877±0.13 2.716±0.34 1.379±0.09 4.056±2.82 5.770±0.94 0.700±0.18
ENSMUST00000114784 9.374±0.64 4.850±0.74 3.838±0.11 13.473±3.93 5.992±0.51 3.648±0.89 2.560±1.28 5.716±1.28 2.008±0.69 7.938±1.55 3.253±1.48 4.846±1.55 7.365±2.79 1.089±0.54
ENSMUST00000144068 8.696±1.08 15.353±4.92 N/A N/A 12.530±5.06 9.115±1.40 2.547±0.52 6.883±2.18 3.649±0.54 11.106±3.14 N/A 5.623±1.13 9.682±0.00 1.177±0.13

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