C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leprecan-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023191 Leprel2 10090 - 6:124841089-124857752 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023958 Leprel2-001 124841089-124857752 protein_coding
  ENSMUST00000126987 Leprel2-007 124841494-124842611 retained_intron
  ENSMUST00000129225 Leprel2-004 124846015-124854827 retained_intron
  ENSMUST00000135127 Leprel2-002 124841206-124857729 nonsense_mediated_decay
  ENSMUST00000135546 Leprel2-003 124854396-124855170 retained_intron
  ENSMUST00000147296 Leprel2-006 124845325-124850993 retained_intron
  ENSMUST00000149870 Leprel2-005 124845973-124854924 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023958ENSMUST00000126987ENSMUST00000129225ENSMUST00000135127ENSMUST00000135546
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023958 11.563±5.69 11.107±3.44 24.954±3.25 13.636±6.75 6.636±2.91 6.690±1.56 3.668±0.42 4.245±0.48 1.240±0.47 11.688±2.01 1.603±0.43 21.778±5.88 3.839±3.15 0.300±0.12
ENSMUST00000126987 N/A N/A N/A 5.495±0.00 N/A N/A N/A N/A N/A N/A N/A 27.812±0.00 1.769±0.74 0.501±0.00
ENSMUST00000129225 N/A N/A N/A N/A 1.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135127 4.488±0.49 2.571±0.46 N/A 6.737±0.72 1.579±0.24 1.224±0.00 0.770±0.00 N/A 0.233±0.13 N/A 0.542±0.03 6.151±0.80 N/A 0.152±0.03
ENSMUST00000135546 N/A N/A N/A 25.919±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005506 IEA iron ion binding
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008285 IEA negative regulation of cell proliferation
GO:0019511 IEA peptidyl-proline hydroxylation
GO:0019797 IEA procollagen-proline 3-dioxygenase activity
GO:0031418 IEA L-ascorbic acid binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057879 leprel2 leprecan-like 2 protein_coding Danio_rerio
ENSG00000110811 LEPREL2 leprecan-like 2 protein_coding Homo_sapiens

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