C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leprecan-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023958 Leprel2-001 ENSMUSG00000023191 10090 - 6:124841089-124857752 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023958
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023958 11.563±5.69 11.107±3.44 24.954±3.25 13.636±6.75 6.636±2.91 6.690±1.56 3.668±0.42 4.245±0.48 1.240±0.47 11.688±2.01 1.603±0.43 21.778±5.88 3.839±3.15 0.300±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005506 IEA iron ion binding
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008285 IEA negative regulation of cell proliferation
GO:0019511 IEA peptidyl-proline hydroxylation
GO:0019797 IEA procollagen-proline 3-dioxygenase activity
GO:0031418 IEA L-ascorbic acid binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290510 LEPREL2-002 protein_coding Homo_sapiens 0 2320
ENST00000536140 LEPREL2-001 retained_intron Homo_sapiens 0 880
ENST00000538102 LEPREL2-006 processed_transcript Homo_sapiens 0 457
ENST00000540406 LEPREL2-012 retained_intron Homo_sapiens 0 586
ENST00000541956 LEPREL2-014 retained_intron Homo_sapiens 0 211
ENST00000542976 LEPREL2-013 retained_intron Homo_sapiens 0 442
ENST00000544200 LEPREL2-011 retained_intron Homo_sapiens 0 769
ENST00000544949 LEPREL2-005 retained_intron Homo_sapiens 0 431
ENST00000612048 LEPREL2-003 retained_intron Homo_sapiens 0 1855

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