C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) C receptor, subunit rho 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023267 Gabrr2 10090 + 4:33062999-33095865 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024035 Gabrr2-201 33063112-33095865 protein_coding
  ENSMUST00000108162 Gabrr2-001 33062999-33095865 protein_coding
  ENSMUST00000131920 Gabrr2-003 33078796-33085564 protein_coding
  ENSMUST00000147889 Gabrr2-002 33081505-33085820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024035ENSMUST00000108162ENSMUST00000131920ENSMUST00000147889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024035 0.448±0.47 0.091±0.05 0.020±0.00 0.147±0.06 0.771±0.48 0.128±0.07 1.080±0.37 0.204±0.07 0.040±0.03 0.188±0.04 0.321±0.07 0.227±0.17 0.170±0.13 0.218±0.13
ENSMUST00000108162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A
ENSMUST00000131920 0.149±0.00 0.039±0.00 N/A N/A N/A 0.297±0.12 0.363±0.00 0.111±0.00 0.045±0.03 N/A 0.395±0.00 0.081±0.05 0.112±0.04 0.224±0.00
ENSMUST00000147889 N/A 0.381±0.27 0.024±0.02 0.173±0.00 0.432±0.05 N/A 0.925±0.00 N/A 0.048±0.02 0.333±0.13 N/A 0.372±0.31 0.022±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 IMP GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005886 IEA plasma membrane
GO:0006821 TAS chloride transport
GO:0007214 IMP gamma-aminobutyric acid signaling pathway
GO:0007601 IMP visual perception
GO:0016021 IEA integral component of membrane
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0030424 TAS axon
GO:0034220 IEA ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014057 gabrr2b gamma-aminobutyric acid (GABA) A receptor, rho 2b protein_coding Danio_rerio
ENSDARG00000052982 gabrr2a gamma-aminobutyric acid (GABA) A receptor, rho 2a protein_coding Danio_rerio
ENSG00000111886 GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2 protein_coding Homo_sapiens

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