C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, rho 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111886 GABRR2 9606 - 6:89257208-89315299 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000402938 GABRR2-001 89257520-89315299 protein_coding
  ENST00000602432 GABRR2-002 89257208-89269353 retained_intron
  ENST00000602808 GABRR2-003 89270393-89315299 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000402938ENST00000602432ENST00000602808
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000402938 N/A N/A 0.023±0.00 0.044±0.00 N/A N/A 0.024±0.00 N/A N/A 0.054±0.00 N/A 0.089±0.00 N/A
ENST00000602432 0.047±0.00 0.565±0.00 0.053±0.00 0.152±0.00 0.168±0.06 0.107±0.02 0.253±0.17 0.062±0.03 0.162±0.07 N/A 0.176±0.06 0.126±0.00 0.157±0.07
ENST00000602808 N/A N/A N/A 0.511±0.00 0.082±0.00 N/A 0.083±0.00 N/A 0.408±0.04 N/A 0.065±0.00 N/A 0.063±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BT CIL_0006BT_0002 CGP 6:89257208-89352848

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 IEA ion transport
GO:0007165 TAS signal transduction
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007601 IEA visual perception
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019904 IEA protein domain specific binding
GO:0030054 IEA cell junction
GO:0034220 TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:0055085 TAS transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014057 gabrr2b gamma-aminobutyric acid (GABA) A receptor, rho 2b protein_coding Danio_rerio
ENSDARG00000052982 gabrr2a gamma-aminobutyric acid (GABA) A receptor, rho 2a protein_coding Danio_rerio
ENSMUSG00000023267 Gabrr2 gamma-aminobutyric acid (GABA) C receptor, subunit rho 2 protein_coding Mus_musculus

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