C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023827 Agpat4 10090 + 17:12118704-12219645 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024594 Agpat4-001 12119284-12219645 protein_coding
  ENSMUST00000164143 Agpat4-003 12118704-12210710 protein_coding
  ENSMUST00000167792 Agpat4-002 12133205-12210361 protein_coding
  ENSMUST00000167905 Agpat4-005 12215125-12219253 retained_intron
  ENSMUST00000170858 Agpat4-006 12151772-12219079 nonsense_mediated_decay
  ENSMUST00000172259 Agpat4-004 12119329-12139655 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024594ENSMUST00000164143ENSMUST00000167792ENSMUST00000167905ENSMUST00000170858
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024594 5.378±2.12 8.727±0.90 6.532±0.74 10.235±2.03 4.280±1.21 34.943±6.45 1.766±0.16 3.006±0.34 7.951±8.19 22.530±0.52 0.771±0.20 10.520±3.14 17.603±5.96 5.557±2.71
ENSMUST00000164143 N/A N/A N/A N/A N/A N/A N/A N/A 0.547±0.00 N/A N/A N/A N/A N/A
ENSMUST00000167792 N/A 4.873±0.32 N/A N/A 2.113±0.61 17.470±1.44 N/A N/A 0.241±0.00 N/A N/A 6.688±0.97 N/A N/A
ENSMUST00000167905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.301±0.09 N/A N/A 2.118±0.00
ENSMUST00000170858 N/A N/A N/A 15.147±0.00 N/A N/A N/A N/A 0.189±0.03 N/A N/A 6.552±0.00 24.621±13.20 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y5 CIL_0007Y5_0002 VISTA 17:11903951-12505747
CIL_00031W CIL_00031W_0002 CGP 17:12118704-12318660

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003841 IEA 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0016746 IEA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069044 agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) protein_coding Danio_rerio
ENSG00000026652 AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 protein_coding Homo_sapiens

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