C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00031W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069044-ENSDARG00000053303 CGP 7955 13:36166809-36228365
GeneTranscriptPositionBiotype
ENSDARG00000053303 (map3k4)
mitogen activated protein kinase kinase kinase 4 		ENSDART00000075333 (map3k4-201) 36190110-36228365 protein_coding
ENSDARG00000069044 (agpat4)
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) 		ENSDART00000100156 (agpat4-201) 36166809-36189709 protein_coding
CIL_00031W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023827-ENSMUSG00000014426 CGP 10090 17:12118704-12318660
GeneTranscriptPositionBiotype
ENSMUSG00000014426 (Map3k4)
mitogen-activated protein kinase kinase kinase 4 		ENSMUST00000089058 (Map3k4-201) 12227621-12318660 protein_coding
ENSMUSG00000023827 (Agpat4)
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) 		ENSMUST00000024594 (Agpat4-001) 12119284-12219645 protein_coding
ENSMUST00000164143 (Agpat4-003) 12118704-12210710 protein_coding
ENSMUST00000167792 (Agpat4-002) 12133205-12210361 protein_coding
ENSMUST00000167905 (Agpat4-005) 12215125-12219253 retained_intron
ENSMUST00000170858 (Agpat4-006) 12151772-12219079 nonsense_mediated_decay
ENSMUST00000172259 (Agpat4-004) 12119329-12139655 processed_transcript
ENSMUSG00000063911 (Tdgf1-ps2)
teratocarcinoma-derived growth factor, pseudogene 2 		ENSMUST00000074412 (Tdgf1-ps2-001) 12189921-12190456 processed_pseudogene
ENSMUSG00000077476 (Gm24794)
predicted gene, 24794 		ENSMUST00000104288 (Gm24794-201) 12301036-12301175 snoRNA
ENSMUSG00000079716 (Map3k4)
 ENSMUST00000115691 (Map3k4-202) 12232481-12271184 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031W_0001ENSDARG00000053303ENSDART00000075333ENSDARG00000069044ENSDART00000100156CIL_00031W_0002ENSMUSG00000014426ENSMUST00000089058ENSMUSG00000023827ENSMUST00000024594ENSMUST00000164143ENSMUST00000167792ENSMUST00000167905ENSMUST00000170858ENSMUST00000172259ENSMUSG00000063911ENSMUST00000074412ENSMUSG00000077476ENSMUST00000104288ENSMUSG00000079716ENSMUST00000115691
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031W_0001ENSDARG00000053303ENSDART00000075333ENSDARG00000069044ENSDART00000100156CIL_00031W_0002ENSMUSG00000014426ENSMUST00000089058ENSMUSG00000023827ENSMUST00000024594ENSMUST00000164143ENSMUST00000167792ENSMUST00000167905ENSMUST00000170858ENSMUSG00000063911ENSMUST00000074412ENSMUSG00000077476ENSMUST00000104288ENSMUSG00000079716ENSMUST00000115691
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053303 ENSDART00000075333 N/A N/A N/A N/A N/A N/A N/A N/A 0.278±0.00 N/A N/A N/A N/A N/A
ENSDARG00000069044 ENSDART00000100156 N/A N/A N/A 2.846±2.41 N/A N/A 3.210±0.82 0.533±0.00 4.764±0.00 N/A 4.384±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014426 ENSMUST00000089058 0.936±0.00 1.305±0.07 2.609±0.10 4.219±0.93 1.642±0.69 2.073±0.43 1.571±0.91 1.929±0.61 0.925±0.47 1.105±0.39 1.523±0.77 3.310±1.61 2.194±0.42 1.068±0.63
ENSMUSG00000023827 ENSMUST00000024594 5.378±2.12 8.727±0.90 6.532±0.74 10.235±2.03 4.280±1.21 34.943±6.45 1.766±0.16 3.006±0.34 7.951±8.19 22.530±0.52 0.771±0.20 10.520±3.14 17.603±5.96 5.557±2.71
ENSMUST00000164143 N/A N/A N/A N/A N/A N/A N/A N/A 0.547±0.00 N/A N/A N/A N/A N/A
ENSMUST00000167792 N/A 4.873±0.32 N/A N/A 2.113±0.61 17.470±1.44 N/A N/A 0.241±0.00 N/A N/A 6.688±0.97 N/A N/A
ENSMUST00000167905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.301±0.09 N/A N/A 2.118±0.00
ENSMUST00000170858 N/A N/A N/A 15.147±0.00 N/A N/A N/A N/A 0.189±0.03 N/A N/A 6.552±0.00 24.621±13.20 N/A
ENSMUST00000172259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063911 ENSMUST00000074412 0.096±0.00 0.295±0.10 0.023±0.00 0.271±0.10 0.286±0.07 0.421±0.04 N/A N/A 0.169±0.12 0.264±0.05 N/A 0.474±0.03 0.128±0.02 0.153±0.05
ENSMUSG00000077476 ENSMUST00000104288 771.918±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.531±0.00 N/A N/A
ENSMUSG00000079716 ENSMUST00000115691 4.039±0.59 1.805±0.37 4.365±0.50 7.682±4.26 2.295±0.37 3.409±0.59 2.525±0.45 3.257±0.62 1.822±0.49 3.296±0.22 6.360±0.72 6.324±3.15 10.087±4.80 1.876±0.49

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