C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007Y5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm156 VISTA 9606 6:160860643-161462319
GeneTranscriptPositionBiotype
ENSG00000026652 (AGPAT4)
1-acylglycerol-3-phosphate O-acyltransferase 4 		ENST00000320285 (AGPAT4-001) 161130025-161274061 protein_coding
ENST00000366905 (AGPAT4-003) 161165838-161274032 protein_coding
ENST00000366911 (AGPAT4-201) 161129979-161274025 protein_coding
ENST00000436279 (AGPAT4-002) 161149205-161232236 nonsense_mediated_decay
ENST00000437165 (AGPAT4-004) 161143956-161149289 protein_coding
ENSG00000085511 (MAP3K4)
mitogen-activated protein kinase kinase kinase 4 		ENST00000348824 (MAP3K4-007) 160991814-161117382 protein_coding
ENST00000366919 (MAP3K4-002) 160991727-161117385 protein_coding
ENST00000366920 (MAP3K4-006) 160991814-161117382 protein_coding
ENST00000392142 (MAP3K4-001) 160991784-161117385 protein_coding
ENST00000446500 (MAP3K4-003) 161034358-161048803 processed_transcript
ENST00000448119 (MAP3K4-010) 161022194-161034449 protein_coding
ENST00000490904 (MAP3K4-004) 160991844-161117308 nonsense_mediated_decay
ENST00000536852 (MAP3K4-008) 161101033-161117384 retained_intron
ENST00000539610 (MAP3K4-014) 161108879-161109886 retained_intron
ENST00000540205 (MAP3K4-012) 161080683-161086599 retained_intron
ENST00000541901 (MAP3K4-016) 161097166-161108933 retained_intron
ENST00000542851 (MAP3K4-011) 161073329-161086444 retained_intron
ENST00000542952 (MAP3K4-009) 160991769-161073536 nonsense_mediated_decay
ENST00000543421 (MAP3K4-013) 161096697-161101992 retained_intron
ENST00000544041 (MAP3K4-005) 160991844-161117308 nonsense_mediated_decay
ENST00000544733 (MAP3K4-015) 161098240-161108754 retained_intron
ENSG00000185345 (PARK2)
parkin RBR E3 ubiquitin protein ligase 		ENST00000338468 (PARK2-003) 161350099-162727668 protein_coding
ENST00000366892 (PARK2-002) 161545112-162727764 protein_coding
ENST00000366894 (PARK2-001) 161350099-162727668 protein_coding
ENST00000366896 (PARK2-006) 161348639-162727771 protein_coding
ENST00000366897 (PARK2-005) 161348639-162727771 protein_coding
ENST00000366898 (PARK2-004) 161347420-162727771 protein_coding
ENST00000479615 (PARK2-007) 161350099-162727668 nonsense_mediated_decay
ENST00000610470 (PARK2-201) 161350099-161569420 protein_coding
ENST00000612485 (PARK2-202) 161548754-161569420 protein_coding
ENST00000612540 (PARK2-203) 162262526-162275386 protein_coding
ENST00000615065 (PARK2-204) 162262461-162262768 protein_coding
ENSG00000224371 (RP11-235G24.1)
 ENST00000413062 (RP11-235G24.1-003) 160873086-160918649 lincRNA
ENST00000437861 (RP11-235G24.1-004) 160872888-160880394 lincRNA
ENST00000443380 (RP11-235G24.1-002) 160873016-160918449 lincRNA
ENST00000454826 (RP11-235G24.1-001) 160872894-160918529 lincRNA
ENSG00000231863 (RP3-428L16.1)
 ENST00000417479 (RP3-428L16.1-001) 160931080-160969771 antisense
ENSG00000233342 (RP11-235G24.3)
 ENST00000420601 (RP11-235G24.3-001) 160926369-160927162 lincRNA
ENSG00000272841 (RP3-428L16.2)
 ENST00000608721 (RP3-428L16.2-001) 160990318-160992342 antisense
ENSG00000279355 (AGPAT4-IT1)
AGPAT4 intronic transcript 1 (non-protein coding) 		ENST00000624499 (AGPAT4-IT1-001) 161160105-161161982 TEC
CIL_0007Y5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm156 VISTA 10090 17:11903951-12505747
GeneTranscriptPositionBiotype
ENSMUSG00000014426 (Map3k4)
mitogen-activated protein kinase kinase kinase 4 		ENSMUST00000089058 (Map3k4-201) 12227621-12318660 protein_coding
ENSMUSG00000023826 (Park2)
Parkinson disease (autosomal recessive, juvenile) 2, parkin 		ENSMUST00000066658 (Park2-003) 10840384-11557234 retained_intron
ENSMUST00000097413 (Park2-002) 10840391-10945412 processed_transcript
ENSMUST00000168593 (Park2-201) 11067125-11493173 protein_coding
ENSMUST00000179624 (Park2-202) 11838602-11867561 protein_coding
ENSMUST00000186167 (Park2-004) 10840384-11557234 retained_intron
ENSMUST00000186406 (Park2-007) 11303647-11610945 protein_coding
ENSMUST00000190849 (Park2-005) 11845210-11867561 processed_transcript
ENSMUST00000190894 (Park2-006) 12029916-12063358 processed_transcript
ENSMUST00000191124 (Park2-001) 10840384-12063361 protein_coding
ENSMUSG00000023827 (Agpat4)
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) 		ENSMUST00000024594 (Agpat4-001) 12119284-12219645 protein_coding
ENSMUST00000164143 (Agpat4-003) 12118704-12210710 protein_coding
ENSMUST00000167792 (Agpat4-002) 12133205-12210361 protein_coding
ENSMUST00000167905 (Agpat4-005) 12215125-12219253 retained_intron
ENSMUST00000170858 (Agpat4-006) 12151772-12219079 nonsense_mediated_decay
ENSMUST00000172259 (Agpat4-004) 12119329-12139655 processed_transcript
ENSMUSG00000023828 (Slc22a3)
solute carrier family 22 (organic cation transporter), member 3 		ENSMUST00000024595 (Slc22a3-201) 12419972-12507704 protein_coding
ENSMUSG00000059481 (Plg)
plasminogen 		ENSMUST00000014578 (Plg-201) 12378609-12419384 protein_coding
ENSMUSG00000063911 (Tdgf1-ps2)
teratocarcinoma-derived growth factor, pseudogene 2 		ENSMUST00000074412 (Tdgf1-ps2-001) 12189921-12190456 processed_pseudogene
ENSMUSG00000077476 (Gm24794)
predicted gene, 24794 		ENSMUST00000104288 (Gm24794-201) 12301036-12301175 snoRNA
ENSMUSG00000079716 (Map3k4)
 ENSMUST00000115691 (Map3k4-202) 12232481-12271184 protein_coding
ENSMUSG00000097350 (4732491K20Rik)
RIKEN cDNA 4732491K20 gene 		ENSMUST00000181774 (4732491K20Rik-201) 12318885-12327250 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Y5_0001ENSG00000026652ENST00000320285ENST00000366905ENST00000366911ENST00000436279ENST00000437165ENSG00000085511ENST00000348824ENST00000366919ENST00000366920ENST00000392142ENST00000446500ENST00000448119ENST00000490904ENST00000536852ENST00000539610ENST00000540205ENST00000541901ENST00000542851ENST00000542952ENST00000543421ENST00000544041ENST00000544733ENSG00000185345ENST00000338468ENST00000366892ENST00000366894ENST00000366896ENST00000366897ENST00000366898ENST00000479615ENST00000610470ENST00000612485ENST00000612540ENST00000615065ENSG00000224371ENST00000413062ENST00000437861ENST00000443380ENST00000454826ENSG00000231863ENST00000417479ENSG00000233342ENST00000420601ENSG00000272841ENST00000608721ENSG00000279355ENST00000624499CIL_0007Y5_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Y5_0001ENSG00000026652ENST00000320285ENST00000366905ENST00000366911ENST00000436279ENSG00000085511ENST00000348824ENST00000366919ENST00000366920ENST00000392142ENST00000490904ENST00000536852ENST00000544041ENSG00000185345ENST00000338468ENST00000366892ENST00000366896ENST00000366897ENST00000366898ENST00000615065ENSG00000224371ENST00000413062ENST00000437861ENST00000443380ENST00000454826ENSG00000231863ENST00000417479ENSG00000233342ENST00000420601ENSG00000272841ENST00000608721ENSG00000279355ENST00000624499CIL_0007Y5_0002ENSMUSG00000014426ENSMUST00000089058ENSMUSG00000023826ENSMUST00000066658ENSMUST00000097413ENSMUST00000168593ENSMUST00000186167ENSMUST00000190894ENSMUST00000191124ENSMUSG00000023827ENSMUST00000024594ENSMUST00000164143ENSMUST00000167792ENSMUST00000167905ENSMUST00000170858ENSMUSG00000023828ENSMUST00000024595ENSMUSG00000059481ENSMUST00000014578ENSMUSG00000063911ENSMUST00000074412ENSMUSG00000077476ENSMUST00000104288ENSMUSG00000079716ENSMUST00000115691ENSMUSG00000097350ENSMUST00000181774
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000026652 ENST00000320285 0.387±0.00 0.216±0.00 N/A 2.911±0.40 0.735±0.00 0.581±0.30 0.305±0.09 0.814±0.00 0.139±0.00 0.650±0.05 0.096±0.00 0.746±0.37 2.154±0.93 0.462±0.00
ENST00000366905 N/A N/A N/A N/A N/A N/A N/A N/A 1.988±0.00 3.391±0.00 N/A 1.520±0.00 N/A N/A
ENST00000366911 N/A N/A N/A 6.123±0.00 N/A 0.506±0.00 N/A 0.245±0.00 N/A N/A 0.129±0.00 0.901±0.51 1.117±0.00 0.981±0.00
ENST00000436279 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.209±0.00 0.550±0.00 N/A N/A N/A
ENST00000437165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000085511 ENST00000348824 2.606±0.00 N/A 1.357±0.00 1.553±0.00 1.996±0.00 3.259±0.52 1.439±0.55 2.714±0.00 0.544±0.00 0.906±0.00 3.024±0.44 2.254±1.22 1.894±0.47 5.012±0.00
ENST00000366919 N/A N/A N/A N/A 1.428±0.00 N/A 0.811±0.30 1.304±0.00 1.271±1.04 0.982±0.00 N/A 2.320±1.75 1.834±1.38 N/A
ENST00000366920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.606±0.32
ENST00000392142 N/A N/A N/A 1.281±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490904 N/A 1.134±0.00 N/A N/A N/A N/A N/A 0.686±0.00 N/A N/A N/A N/A N/A N/A
ENST00000536852 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.594±0.00 N/A 2.420±0.00 N/A N/A
ENST00000539610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544041 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.870±0.00 N/A 1.190±0.00 N/A N/A
ENST00000544733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185345 ENST00000338468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 0.312±0.00 N/A
ENST00000366892 N/A N/A N/A N/A N/A 1.030±0.00 N/A N/A 1.234±0.00 0.716±0.00 N/A N/A N/A 1.097±0.00
ENST00000366894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366896 N/A N/A 18.674±0.00 5.366±0.00 N/A N/A N/A N/A 1.720±0.00 N/A 7.981±0.00 N/A N/A N/A
ENST00000366897 N/A N/A N/A 3.221±0.00 0.604±0.00 0.787±0.00 2.073±0.00 0.915±0.00 1.890±0.00 1.213±0.00 N/A 0.952±0.00 0.083±0.00 N/A
ENST00000366898 0.822±0.00 N/A N/A 1.841±0.00 1.121±0.69 0.353±0.00 2.714±1.26 2.002±0.00 0.309±0.00 0.176±0.00 N/A 0.729±0.09 0.086±0.00 2.015±0.00
ENST00000479615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.655±0.00 N/A
ENSG00000224371 ENST00000413062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.04
ENST00000437861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.02 N/A
ENST00000443380 N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A 0.243±0.00
ENST00000454826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.304±0.00 0.203±0.00
ENSG00000231863 ENST00000417479 N/A N/A N/A 0.167±0.00 N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A 0.129±0.00 0.142±0.00
ENSG00000233342 ENST00000420601 N/A N/A N/A N/A N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A N/A 0.248±0.00
ENSG00000272841 ENST00000608721 N/A N/A N/A 2.859±0.00 N/A N/A N/A N/A N/A N/A N/A 2.582±0.00 2.254±0.49 N/A
ENSG00000279355 ENST00000624499 0.183±0.00 0.350±0.00 0.461±0.00 1.558±0.87 0.349±0.09 0.243±0.10 0.147±0.05 0.342±0.04 0.100±0.06 0.713±0.39 0.099±0.00 0.211±0.13 0.195±0.19 0.535±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014426 ENSMUST00000089058 0.936±0.00 1.305±0.07 2.609±0.10 4.219±0.93 1.642±0.69 2.073±0.43 1.571±0.91 1.929±0.61 0.925±0.47 1.105±0.39 1.523±0.77 3.310±1.61 2.194±0.42 1.068±0.63
ENSMUSG00000023826 ENSMUST00000066658 N/A N/A N/A 1.624±0.00 N/A 0.365±0.07 N/A N/A 3.975±1.34 N/A N/A 1.084±0.00 0.298±0.16 N/A
ENSMUST00000097413 N/A N/A N/A N/A N/A N/A 0.274±0.07 N/A 0.021±0.01 N/A 0.192±0.00 N/A 0.031±0.00 N/A
ENSMUST00000168593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 3.807±0.00
ENSMUST00000179624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186167 0.888±0.15 1.296±0.68 1.865±0.00 1.269±0.00 1.098±0.56 0.752±0.31 1.291±0.34 1.578±0.45 0.610±0.51 1.071±0.17 1.314±0.26 0.764±0.21 0.125±0.03 2.518±0.32
ENSMUST00000186406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190894 N/A N/A N/A N/A N/A 0.238±0.00 N/A N/A 0.031±0.00 N/A N/A 0.485±0.27 0.418±0.42 N/A
ENSMUST00000191124 2.077±0.90 1.485±0.72 1.263±0.01 1.251±0.79 0.970±0.30 0.310±0.13 0.807±0.43 1.780±0.49 0.365±0.33 1.189±0.06 1.318±0.38 1.436±0.63 0.158±0.10 6.147±2.43
ENSMUSG00000023827 ENSMUST00000024594 5.378±2.12 8.727±0.90 6.532±0.74 10.235±2.03 4.280±1.21 34.943±6.45 1.766±0.16 3.006±0.34 7.951±8.19 22.530±0.52 0.771±0.20 10.520±3.14 17.603±5.96 5.557±2.71
ENSMUST00000164143 N/A N/A N/A N/A N/A N/A N/A N/A 0.547±0.00 N/A N/A N/A N/A N/A
ENSMUST00000167792 N/A 4.873±0.32 N/A N/A 2.113±0.61 17.470±1.44 N/A N/A 0.241±0.00 N/A N/A 6.688±0.97 N/A N/A
ENSMUST00000167905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.301±0.09 N/A N/A 2.118±0.00
ENSMUST00000170858 N/A N/A N/A 15.147±0.00 N/A N/A N/A N/A 0.189±0.03 N/A N/A 6.552±0.00 24.621±13.20 N/A
ENSMUST00000172259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000023828 ENSMUST00000024595 24.250±6.06 5.326±1.37 0.447±0.10 0.274±0.03 12.535±3.07 0.641±0.12 3.109±0.21 0.803±0.09 1.072±0.76 3.978±0.26 0.206±0.09 8.345±3.67 12.488±10.05 0.174±0.00
ENSMUSG00000059481 ENSMUST00000014578 0.086±0.06 0.146±0.15 0.017±0.00 0.058±0.00 1.650±0.16 0.046±0.02 0.071±0.06 0.024±0.01 560.414±267.72 0.234±0.08 0.037±0.03 0.342±0.43 21.539±22.13 0.061±0.03
ENSMUSG00000063911 ENSMUST00000074412 0.096±0.00 0.295±0.10 0.023±0.00 0.271±0.10 0.286±0.07 0.421±0.04 N/A N/A 0.169±0.12 0.264±0.05 N/A 0.474±0.03 0.128±0.02 0.153±0.05
ENSMUSG00000077476 ENSMUST00000104288 771.918±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.531±0.00 N/A N/A
ENSMUSG00000079716 ENSMUST00000115691 4.039±0.59 1.805±0.37 4.365±0.50 7.682±4.26 2.295±0.37 3.409±0.59 2.525±0.45 3.257±0.62 1.822±0.49 3.296±0.22 6.360±0.72 6.324±3.15 10.087±4.80 1.876±0.49
ENSMUSG00000097350 ENSMUST00000181774 0.525±0.04 0.232±0.03 0.606±0.07 0.979±0.17 0.368±0.10 0.463±0.10 0.719±0.09 1.069±0.04 0.233±0.12 0.381±0.06 0.571±0.25 0.480±0.21 0.318±0.19 0.101±0.05

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