C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcitonin receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023964 Calcr 10090 - 6:3685677-3764713 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075644 Calcr-001 3685734-3764654 protein_coding
  ENSMUST00000115622 Calcr-005 3685720-3764713 protein_coding
  ENSMUST00000168592 Calcr-201 3686822-3752974 protein_coding
  ENSMUST00000170266 Calcr-202 3686822-3752974 protein_coding
  ENSMUST00000171396 Calcr-004 3685677-3723001 protein_coding
  ENSMUST00000171613 Calcr-003 3685680-3763629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168592ENSMUST00000170266ENSMUST00000171396ENSMUST00000171613
Transcript ID Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168592 0.011±0.00 N/A 0.082±0.08 0.140±0.06 0.010±0.01 0.084±0.03 0.062±0.00 N/A N/A 0.039±0.01
ENSMUST00000170266 N/A 0.514±0.35 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171396 N/A N/A 0.052±0.04 0.035±0.00 0.003±0.00 0.059±0.00 0.117±0.02 N/A 0.014±0.00 0.010±0.00
ENSMUST00000171613 N/A 0.377±0.03 0.039±0.00 0.146±0.07 N/A 0.060±0.02 0.155±0.02 0.053±0.00 0.110±0.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0002 VISTA 6:3209886-3814285
CIL_0004SU CIL_0004SU_0003 CGP 6:3498382-3764713

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0004948 IDA calcitonin receptor activity
GO:0005886 IEA plasma membrane
GO:0005929 IDA cilium
GO:0007188 IEA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007189 IDA adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0016021 IEA integral component of membrane
GO:0030279 IMP negative regulation of ossification
GO:0030316 IDA osteoclast differentiation
GO:0030424 IEA axon
GO:0032841 IEA calcitonin binding
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0043488 IDA regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028845 calcr calcitonin receptor protein_coding Danio_rerio
ENSG00000004948 CALCR calcitonin receptor protein_coding Homo_sapiens

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