C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcitonin receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000004948 CALCR 9606 - 7:93424487-93574730 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359558 CALCR-201 93424487-93574730 protein_coding
  ENST00000360249 CALCR-202 93426310-93487013 protein_coding
  ENST00000394441 CALCR-002 93426323-93559810 protein_coding
  ENST00000415529 CALCR-004 93426356-93486981 nonsense_mediated_decay
  ENST00000421592 CALCR-001 93424492-93574480 protein_coding
  ENST00000423724 CALCR-003 93426356-93486981 nonsense_mediated_decay
  ENST00000426151 CALCR-005 93426323-93574730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartLiverLungMuscleOvaryPlacentaTestisENST00000359558ENST00000360249ENST00000394441ENST00000415529ENST00000421592ENST00000426151
Transcript ID Adipose Bladder Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000359558 N/A N/A N/A 0.001±0.00 N/A N/A N/A 0.002±0.00 N/A N/A
ENST00000360249 0.012±0.00 0.511±0.00 N/A N/A N/A N/A N/A 0.014±0.00 N/A 0.060±0.00
ENST00000394441 N/A N/A N/A N/A 0.221±0.00 0.169±0.00 N/A N/A N/A N/A
ENST00000415529 N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000421592 0.017±0.00 N/A 0.024±0.00 0.010±0.00 0.072±0.00 0.035±0.00 N/A 0.008±0.00 0.246±0.07 0.057±0.00
ENST00000426151 N/A N/A N/A N/A N/A N/A 0.111±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0001 VISTA 7:92945640-93549905
CIL_0004SU CIL_0004SU_0002 CGP 7:93232340-93574730

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0004872 IDA receptor activity
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0004948 IEA calcitonin receptor activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0005929 IEA cilium
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007188 IEA adenylate cyclase-modulating G-protein coupled receptor signaling pathway
GO:0007189 IEA adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0008565 IDA protein transporter activity
GO:0015031 IDA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030279 IEA negative regulation of ossification
GO:0030316 IEA osteoclast differentiation
GO:0030424 IEA axon
GO:0030819 IDA positive regulation of cAMP biosynthetic process
GO:0031623 IDA receptor internalization
GO:0032841 IEA calcitonin binding
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0043488 IEA regulation of mRNA stability
GO:0045762 IDA positive regulation of adenylate cyclase activity
GO:0051384 IDA response to glucocorticoid
GO:0072659 IDA protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028845 calcr calcitonin receptor protein_coding Danio_rerio
ENSMUSG00000023964 Calcr calcitonin receptor protein_coding Mus_musculus

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