C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcitonin receptor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171613 Calcr-003 ENSMUSG00000023964 10090 - 6:3685680-3763629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLungMuscleOvaryPlacentaENSMUST00000171613
Transcript ID Brain Breast Kidney Lung Muscle Ovary Placenta
ENSMUST00000171613 0.377±0.03 0.039±0.00 0.146±0.07 0.060±0.02 0.155±0.02 0.053±0.00 0.110±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E8 CIL_0008E8_0002 VISTA 6:3209886-3814285
CIL_0004SU CIL_0004SU_0003 CGP 6:3498382-3764713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0004948 IDA calcitonin receptor activity
GO:0005886 IEA plasma membrane
GO:0005929 IDA cilium
GO:0007189 IDA adenylate cyclase-activating G-protein coupled receptor signaling pathway
GO:0007204 IDA positive regulation of cytosolic calcium ion concentration
GO:0016021 IEA integral component of membrane
GO:0030279 IMP negative regulation of ossification
GO:0030316 IDA osteoclast differentiation
GO:0043488 IDA regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359558 CALCR-201 protein_coding Homo_sapiens 0 1260
ENST00000360249 CALCR-202 protein_coding Homo_sapiens 0 1140
ENST00000394441 CALCR-002 protein_coding Homo_sapiens 0 1122
ENST00000415529 CALCR-004 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000421592 CALCR-001 protein_coding Homo_sapiens 0 1260
ENST00000423724 CALCR-003 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000426151 CALCR-005 protein_coding Homo_sapiens 0 1122

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