C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trefoil factor 2 (spasmolytic protein 1)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024028 Tff2 10090 - 17:31141049-31144282 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024826 Tff2-001 31141049-31144282 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000024826
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000024826 0.099±0.05 0.495±0.24 0.047±0.01 0.016±0.00 31.346±30.06 0.701±0.50 0.089±0.03 0.123±0.07 8.398±6.28 0.361±0.24 0.018±0.01 0.248±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QJ CIL_0008QJ_0002 VISTA 17:31053737-31653776
CIL_0004Y5 CIL_0004Y5_0002 CGP 17:31125306-31144282
CIL_00036E CIL_00036E_0002 CGP 17:31141049-31165053

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0008284 IMP positive regulation of cell proliferation
GO:0019722 IDA calcium-mediated signaling
GO:0030334 IGI regulation of cell migration
GO:0031723 IDA CXCR4 chemokine receptor binding
GO:0043031 IMP negative regulation of macrophage activation
GO:0050728 IMP negative regulation of inflammatory response
GO:0060455 IMP negative regulation of gastric acid secretion
GO:0070062 IEA extracellular vesicular exosome
GO:0070098 IGI chemokine-mediated signaling pathway
GO:0070374 IGI positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000160181 TFF2 trefoil factor 2 protein_coding Homo_sapiens

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