C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004Y5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160180-ENSG00000160181 CGP 9606 21:42311667-42351128
GeneTranscriptPositionBiotype
ENSG00000160180 (TFF3)
trefoil factor 3 (intestinal)
ENST00000291525 (TFF3-201) 42312074-42315353 protein_coding
ENST00000398431 (TFF3-002) 42312053-42315336 protein_coding
ENST00000489676 (TFF3-003) 42312053-42313686 processed_transcript
ENST00000518498 (TFF3-001) 42311667-42315651 protein_coding
ENSG00000160181 (TFF2)
trefoil factor 2
ENST00000291526 (TFF2-001) 42346357-42351128 protein_coding
ENST00000463771 (TFF2-003) 42346374-42350997 processed_transcript
ENST00000475297 (TFF2-002) 42346422-42350994 processed_transcript
CIL_0004Y5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024029-ENSMUSG00000024028 CGP 10090 17:31125306-31144282
GeneTranscriptPositionBiotype
ENSMUSG00000024028 (Tff2)
trefoil factor 2 (spasmolytic protein 1)
ENSMUST00000024826 (Tff2-001) 31141049-31144282 protein_coding
ENSMUSG00000024029 (Tff3)
trefoil factor 3, intestinal
ENSMUST00000024827 (Tff3-001) 31125306-31129646 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Y5_0001ENSG00000160180ENST00000291525ENST00000398431ENST00000489676ENST00000518498ENSG00000160181ENST00000291526ENST00000463771ENST00000475297CIL_0004Y5_0002ENSMUSG00000024028ENSMUST00000024826ENSMUSG00000024029ENSMUST00000024827
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Y5_0001ENSG00000160180ENST00000291525ENST00000489676ENST00000518498ENSG00000160181ENST00000291526ENST00000463771ENST00000475297CIL_0004Y5_0002ENSMUSG00000024028ENSMUST00000024826ENSMUSG00000024029ENSMUST00000024827
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000160180 ENST00000291525 3.756±0.00 15.874±0.00 N/A 0.095±0.00 39.469±27.42 136.360±106.95 0.929±0.00 0.969±0.73 0.725±0.08 24.582±22.10 0.433±0.00 13.081±4.88 N/A 4.686±0.00
ENST00000398431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489676 1.518±0.00 N/A N/A 0.035±0.00 15.170±13.34 249.962±0.00 N/A N/A 0.626±0.00 32.892±31.12 0.545±0.00 15.969±11.44 0.501±0.00 1.166±0.00
ENST00000518498 1.327±0.00 3.746±0.00 N/A 0.063±0.00 12.363±11.43 7.311±0.00 0.213±0.00 0.439±0.33 0.241±0.00 N/A 0.236±0.00 4.127±1.65 0.272±0.11 0.670±0.36
ENSG00000160181 ENST00000291526 N/A N/A N/A N/A 1.772±0.00 N/A N/A N/A 0.532±0.00 N/A N/A 0.591±0.00 N/A N/A
ENST00000463771 0.629±0.00 N/A N/A N/A 0.890±0.71 N/A N/A N/A N/A N/A N/A 0.303±0.19 N/A N/A
ENST00000475297 N/A 0.077±0.00 N/A N/A N/A N/A 0.218±0.00 0.164±0.00 N/A 0.312±0.00 N/A N/A N/A 0.144±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024028 ENSMUST00000024826 0.099±0.05 0.495±0.24 0.047±0.01 0.016±0.00 N/A 31.346±30.06 0.701±0.50 0.089±0.03 0.123±0.07 8.398±6.28 N/A 0.361±0.24 0.018±0.01 0.248±0.17
ENSMUSG00000024029 ENSMUST00000024827 0.435±0.20 0.333±0.11 0.047±0.00 0.320±0.02 0.101±0.00 2800.210±686.87 0.150±0.08 0.079±0.00 57.300±118.74 10.663±0.08 N/A 1.259±0.59 9.632±8.47 0.270±0.20

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