C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: praja 2, RING-H2 motif containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024888 Pja2-201 ENSMUSG00000024083 10090 - 17:64281006-64313031 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024888 3.276±0.53 3.813±0.69 7.866±1.26 29.602±0.00 2.145±0.54 2.243±0.31 1.970±0.00 2.677±0.64 1.469±0.67 5.878±2.47 4.180±0.12 6.069±3.52 4.944±1.23 8.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075K CIL_00075K_0002 CGP 17:63896018-64331916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 ISS plasma membrane
GO:0007616 ISS long-term memory
GO:0008270 IEA zinc ion binding
GO:0010738 ISS regulation of protein kinase A signaling
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0034236 ISS protein kinase A catalytic subunit binding
GO:0034237 ISS protein kinase A regulatory subunit binding
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361189 PJA2-001 protein_coding Homo_sapiens 0 2353
ENST00000361557 PJA2-201 protein_coding Homo_sapiens 0 2353
ENST00000511624 PJA2-003 processed_transcript Homo_sapiens 0 405

Loading