C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vesicle-associated membrane protein, associated protein A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024091 Vapa 10090 - 17:65580056-65613555 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024897 Vapa-201 65580056-65613555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024897
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024897 39.410±10.02 266.100±44.18 62.341±6.85 57.215±17.90 72.158±51.47 140.811±11.79 19.468±2.65 40.228±13.96 35.377±7.23 102.594±31.07 50.142±1.91 170.073±66.08 83.749±23.01 23.805±10.70

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0007165 IEA signal transduction
GO:0008219 ISS cell death
GO:0015630 IDA microtubule cytoskeleton
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0031175 ISS neuron projection development
GO:0031982 IEA vesicle
GO:0043123 IEA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046982 IEA protein heterodimerization activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0070972 ISS protein localization to endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004312 vapa VAMP (vesicle-associated membrane protein)-associated protein A protein_coding Danio_rerio
ENSDARG00000046048 vapal VAMP (vesicle-associated membrane protein)-associated protein A, like protein_coding Danio_rerio
ENSG00000101558 VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa protein_coding Homo_sapiens

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