C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, T type, alpha 1H subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024112 Cacna1h 10090 - 17:25374285-25433783 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078496 Cacna1h-201 25374295-25433783 protein_coding
  ENSMUST00000159048 Cacna1h-002 25374288-25433783 protein_coding
  ENSMUST00000159052 Cacna1h-003 25431839-25433783 retained_intron
  ENSMUST00000159331 Cacna1h-010 25377551-25378943 retained_intron
  ENSMUST00000159610 Cacna1h-001 25374285-25433783 protein_coding
  ENSMUST00000159623 Cacna1h-006 25397625-25433278 protein_coding
  ENSMUST00000161035 Cacna1h-008 25376884-25380651 protein_coding
  ENSMUST00000161454 Cacna1h-004 25392246-25433768 retained_intron
  ENSMUST00000161658 Cacna1h-009 25377196-25380279 nonsense_mediated_decay
  ENSMUST00000162820 Cacna1h-007 25388240-25389472 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078496ENSMUST00000159048ENSMUST00000159052ENSMUST00000159610ENSMUST00000161658
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078496 N/A N/A N/A N/A 0.120±0.00 N/A N/A 0.031±0.00 0.054±0.04 N/A N/A 2.204±0.19 0.016±0.01 N/A
ENSMUST00000159048 0.603±0.49 7.330±1.59 N/A N/A 0.095±0.01 3.038±0.00 0.655±0.00 0.230±0.00 0.014±0.01 0.128±0.00 0.110±0.00 2.956±0.90 0.016±0.01 4.637±0.00
ENSMUST00000159052 N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A
ENSMUST00000159610 1.149±1.15 21.206±3.97 6.950±2.77 5.239±0.29 0.252±0.00 8.113±0.90 3.031±0.24 0.023±0.00 0.140±0.13 0.272±0.05 0.247±0.03 6.947±2.37 0.183±0.23 26.089±0.67
ENSMUST00000161658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005891 ISS voltage-gated calcium channel complex
GO:0005901 IDA caveola
GO:0008332 IBA low voltage-gated calcium channel activity
GO:0016021 IEA integral component of membrane
GO:0032342 IEA aldosterone biosynthetic process
GO:0032870 IEA cellular response to hormone stimulus
GO:0034651 IEA cortisol biosynthetic process
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035865 IEA cellular response to potassium ion
GO:0042383 IDA sarcolemma
GO:0042391 IEA regulation of membrane potential
GO:0045956 IBA positive regulation of calcium ion-dependent exocytosis
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential
GO:0097110 IEA scaffold protein binding
GO:2000344 IEA positive regulation of acrosome reaction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060496 cacna1ha calcium channel, voltage-dependent, T type, alpha 1H subunit a protein_coding Danio_rerio
ENSDARG00000070528 cacna1hb calcium channel, voltage-dependent, T type, alpha 1H subunit b protein_coding Danio_rerio
ENSG00000196557 CACNA1H calcium channel, voltage-dependent, T type, alpha 1H subunit protein_coding Homo_sapiens

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