C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, T type, alpha 1H subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196557 CACNA1H 9606 + 16:1153241-1221771 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000348261 CACNA1H-001 1153241-1221768 protein_coding
  ENST00000358590 CACNA1H-201 1153241-1221771 protein_coding
  ENST00000562079 CACNA1H-005 1210067-1221084 protein_coding
  ENST00000564231 CACNA1H-003 1210067-1221084 protein_coding
  ENST00000564927 CACNA1H-006 1211482-1221765 protein_coding
  ENST00000564954 CACNA1H-007 1195029-1198934 retained_intron
  ENST00000565831 CACNA1H-002 1153738-1221084 protein_coding
  ENST00000569107 CACNA1H-004 1210067-1221084 protein_coding
  ENST00000569953 CACNA1H-008 1209356-1211448 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000348261ENST00000358590ENST00000562079ENST00000564231ENST00000564927ENST00000565831ENST00000569107
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000348261 1.140±0.00 6.493±0.00 0.434±0.00 0.890±0.00 1.211±0.00 N/A 1.107±0.00 1.907±0.16 2.661±0.88 N/A N/A 11.858±15.31 0.760±0.00 6.075±3.29
ENST00000358590 N/A N/A N/A N/A N/A 0.628±0.00 N/A 1.324±0.00 N/A 1.817±0.00 0.619±0.00 N/A 1.276±0.00 N/A
ENST00000562079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.102±0.00 N/A N/A N/A
ENST00000564231 N/A 2.835±0.00 N/A 0.640±0.00 N/A N/A N/A N/A N/A 0.143±0.00 N/A N/A 0.896±0.00 N/A
ENST00000564927 4.065±0.00 2.671±0.00 1.094±0.00 0.351±0.00 0.749±0.00 23.797±0.00 1.129±0.00 2.660±0.00 1.120±0.00 3.322±0.00 0.576±0.00 20.295±14.01 1.075±0.45 10.228±0.42
ENST00000565831 N/A N/A N/A 0.587±0.00 1.132±0.00 N/A N/A N/A N/A 0.170±0.00 0.072±0.00 0.572±0.00 N/A N/A
ENST00000569107 N/A N/A N/A N/A N/A 1.696±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0005886 IBA plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0005901 IEA caveola
GO:0006810 TAS transport
GO:0006811 IEA ion transport
GO:0006936 TAS muscle contraction
GO:0007411 TAS axon guidance
GO:0007517 NAS muscle organ development
GO:0007520 TAS myoblast fusion
GO:0008016 TAS regulation of heart contraction
GO:0008332 IDA low voltage-gated calcium channel activity
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane
GO:0032342 IMP aldosterone biosynthetic process
GO:0032870 IEP cellular response to hormone stimulus
GO:0034651 IMP cortisol biosynthetic process
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035865 IEP cellular response to potassium ion
GO:0042383 IEA sarcolemma
GO:0042391 IDA regulation of membrane potential
GO:0046872 IEA metal ion binding
GO:0055085 IEA transmembrane transport
GO:0070509 IDA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential
GO:0097110 IPI scaffold protein binding
GO:2000344 IMP positive regulation of acrosome reaction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060496 cacna1ha calcium channel, voltage-dependent, T type, alpha 1H subunit a protein_coding Danio_rerio
ENSDARG00000070528 cacna1hb calcium channel, voltage-dependent, T type, alpha 1H subunit b protein_coding Danio_rerio
ENSMUSG00000024112 Cacna1h calcium channel, voltage-dependent, T type, alpha 1H subunit protein_coding Mus_musculus

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