C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (RNA) II (DNA directed) polypeptide D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024258 Polr2d 10090 + 18:31789159-31796642 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025106 Polr2d-201 31789159-31796642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025106
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025106 25.281±1.63 9.866±0.67 21.781±6.40 32.267±18.40 14.966±5.16 8.583±0.38 15.787±0.54 14.084±2.63 16.172±13.40 14.768±2.16 6.006±0.93 20.799±3.01 20.269±6.84 9.473±3.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000288 IBA nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 IBA cytoplasmic mRNA processing body
GO:0003697 IBA single-stranded DNA binding
GO:0003727 IBA single-stranded RNA binding
GO:0003899 ISS DNA-directed RNA polymerase activity
GO:0005634 ISS nucleus
GO:0005665 ISS DNA-directed RNA polymerase II, core complex
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0006367 IBA transcription initiation from RNA polymerase II promoter
GO:0031369 IBA translation initiation factor binding
GO:0031990 IBA mRNA export from nucleus in response to heat stress
GO:0034402 IBA recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex
GO:0045948 IBA positive regulation of translational initiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076509 polr2d polymerase (RNA) II (DNA directed) polypeptide D protein_coding Danio_rerio
ENSG00000144231 POLR2D polymerase (RNA) II (DNA directed) polypeptide D protein_coding Homo_sapiens

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