C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IF
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024300 Myo1f 10090 + 17:33555719-33607764 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087605 Myo1f-001 33555719-33607762 protein_coding
  ENSMUST00000173372 Myo1f-002 33555745-33607758 nonsense_mediated_decay
  ENSMUST00000173426 Myo1f-003 33582603-33607764 retained_intron
  ENSMUST00000174695 Myo1f-004 33555765-33578149 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087605ENSMUST00000173372ENSMUST00000173426
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087605 5.473±1.42 0.773±0.44 2.810±0.07 0.379±0.04 5.137±1.98 1.365±0.31 0.904±0.30 0.852±0.27 3.313±2.17 8.320±0.91 0.092±0.03 2.033±0.78 0.734±0.24 0.147±0.03
ENSMUST00000173372 N/A 0.687±0.13 N/A 0.486±0.00 1.991±0.98 1.311±0.53 N/A 0.489±0.34 0.626±0.09 N/A 0.230±0.13 1.625±1.13 0.336±0.03 0.116±0.00
ENSMUST00000173426 N/A 0.270±0.02 N/A N/A 0.942±0.00 N/A N/A N/A N/A 1.145±0.00 0.045±0.02 0.375±0.05 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002446 IMP neutrophil mediated immunity
GO:0003674 ND molecular_function
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0007162 IMP negative regulation of cell adhesion
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex
GO:0030335 IMP positive regulation of cell migration
GO:0030864 IDA cortical actin cytoskeleton
GO:0031941 IDA filamentous actin
GO:0032956 IMP regulation of actin cytoskeleton organization
GO:0043312 IMP neutrophil degranulation
GO:0045088 IMP regulation of innate immune response
GO:0050830 IMP defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078734 myo1f myosin IF protein_coding Danio_rerio
ENSG00000142347 MYO1F myosin IF protein_coding Homo_sapiens

Loading