C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAP binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024308 Tapbp 10090 + 17:33915899-33929288 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025161 Tapbp-001 33919332-33929288 protein_coding
  ENSMUST00000172489 Tapbp-004 33920528-33926197 processed_transcript
  ENSMUST00000172619 Tapbp-005 33915899-33920415 protein_coding
  ENSMUST00000172653 Tapbp-003 33926118-33928276 retained_intron
  ENSMUST00000172888 Tapbp-002 33919512-33920375 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025161 82.477±20.87 75.639±19.83 44.497±6.29 5.968±3.38 105.662±17.63 81.728±19.28 20.437±3.87 35.369±1.29 21.659±11.15 76.401±18.55 3.589±2.23 47.399±23.37 25.006±11.62 21.680±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RR CIL_0002RR_0002 CGP 17:33909414-33929288
CIL_000426 CIL_000426_0002 CGP 17:33915899-33929288

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002397 IEA MHC class I protein complex assembly
GO:0002479 IDA antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 IPI protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006952 IMP defense response
GO:0019885 IEA antigen processing and presentation of endogenous peptide antigen via MHC class I
GO:0030670 TAS phagocytic vesicle membrane
GO:0042824 IEA MHC class I peptide loading complex
GO:0050823 IMP peptide antigen stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045011 TAPBP (1 of 2) TAP binding protein (tapasin) protein_coding Danio_rerio
ENSDARG00000079402 tapbp TAP binding protein protein_coding Danio_rerio
ENSG00000231925 TAPBP TAP binding protein (tapasin) protein_coding Homo_sapiens

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