C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TAP binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025161 Tapbp-001 ENSMUSG00000024308 10090 + 17:33919332-33929288 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025161 82.477±20.87 75.639±19.83 44.497±6.29 5.968±3.38 105.662±17.63 81.728±19.28 20.437±3.87 35.369±1.29 21.659±11.15 76.401±18.55 3.589±2.23 47.399±23.37 25.006±11.62 21.680±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RR CIL_0002RR_0002 CGP 17:33909414-33929288
CIL_000426 CIL_000426_0002 CGP 17:33915899-33929288

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002397 IEA MHC class I protein complex assembly
GO:0002479 IDA antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 IPI protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006952 IMP defense response
GO:0019885 IEA antigen processing and presentation of endogenous peptide antigen via MHC class I
GO:0030670 TAS phagocytic vesicle membrane
GO:0042824 IEA MHC class I peptide loading complex
GO:0050823 IMP peptide antigen stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374568 TAPBP-007 protein_coding Homo_sapiens 0 580
ENST00000374572 TAPBP-001 protein_coding Homo_sapiens 0 952
ENST00000383065 TAPBP-008 protein_coding Homo_sapiens 0 952
ENST00000383066 TAPBP-001 protein_coding Homo_sapiens 0 952
ENST00000383067 TAPBP-007 protein_coding Homo_sapiens 0 580
ENST00000383197 TAPBP-008 protein_coding Homo_sapiens 0 952
ENST00000383198 TAPBP-001 protein_coding Homo_sapiens 0 952
ENST00000395114 TAPBP-008 protein_coding Homo_sapiens 0 952
ENST00000412144 TAPBP-007 protein_coding Homo_sapiens 0 580
ENST00000417059 TAPBP-001 protein_coding Homo_sapiens 0 952
ENST00000426633 TAPBP-008 protein_coding Homo_sapiens 0 952
ENST00000434618 TAPBP-001 protein_coding Homo_sapiens 0 952
ENST00000437116 TAPBP-003 retained_intron Homo_sapiens 0 843
ENST00000437315 TAPBP-007 protein_coding Homo_sapiens 0 580
ENST00000456807 TAPBP-008 protein_coding Homo_sapiens 0 952
ENST00000460153 TAPBP-003 processed_transcript Homo_sapiens 0 843
ENST00000462962 TAPBP-003 processed_transcript Homo_sapiens 0 843
ENST00000475304 TAPBP-007 protein_coding Homo_sapiens 0 580
ENST00000479706 TAPBP-003 processed_transcript Homo_sapiens 0 843
ENST00000480730 TAPBP-002 retained_intron Homo_sapiens 0 246
ENST00000481172 TAPBP-002 retained_intron Homo_sapiens 0 246
ENST00000489157 TAPBP-006 protein_coding Homo_sapiens 0 579
ENST00000493108 TAPBP-002 retained_intron Homo_sapiens 0 246
ENST00000493747 TAPBP-002 retained_intron Homo_sapiens 0 246
ENST00000494432 TAPBP-002 retained_intron Homo_sapiens 0 246
ENST00000494466 TAPBP-003 processed_transcript Homo_sapiens 0 843
ENST00000549142 TAPBP-205 protein_coding Homo_sapiens 0 579
ENST00000550330 TAPBP-201 protein_coding Homo_sapiens 0 579
ENST00000551943 TAPBP-203 protein_coding Homo_sapiens 0 579
ENST00000553235 TAPBP-207 protein_coding Homo_sapiens 0 579

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