C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alpha tubulin acetyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024426 Atat1 10090 - 17:35897595-35910075 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056034 Atat1-005 35899852-35910045 protein_coding
  ENSMUST00000061052 Atat1-001 35897595-35910075 protein_coding
  ENSMUST00000077494 Atat1-002 35897609-35910046 protein_coding
  ENSMUST00000126744 Atat1-013 35897882-35908961 nonsense_mediated_decay
  ENSMUST00000127959 Atat1-007 35907965-35910045 processed_transcript
  ENSMUST00000130309 Atat1-012 35902005-35909039 retained_intron
  ENSMUST00000137069 Atat1-010 35902001-35909573 processed_transcript
  ENSMUST00000137182 Atat1-008 35908584-35910031 nonsense_mediated_decay
  ENSMUST00000140292 Atat1-014 35900493-35904327 protein_coding
  ENSMUST00000140990 Atat1-006 35903331-35909739 retained_intron
  ENSMUST00000141132 Atat1-009 35902038-35909626 protein_coding
  ENSMUST00000141662 Atat1-004 35899817-35910045 protein_coding
  ENSMUST00000143114 Atat1-015 35897615-35898582 retained_intron
  ENSMUST00000149277 Atat1-003 35897612-35910057 protein_coding
  ENSMUST00000151009 Atat1-011 35901984-35909435 retained_intron
  ENSMUST00000174436 Atat1-016 35908931-35910009 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryTestisENSMUST00000056034ENSMUST00000061052ENSMUST00000077494ENSMUST00000127959ENSMUST00000137182ENSMUST00000141662ENSMUST00000149277
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Testis
ENSMUST00000056034 10.595±3.37 20.458±4.52 N/A 74.167±46.99 13.289±0.91 12.727±0.00 9.656±2.45 8.100±1.04 15.925±2.16 24.134±2.59
ENSMUST00000061052 12.160±0.14 N/A N/A N/A 12.603±0.23 N/A 7.794±0.00 9.663±1.11 19.688±4.41 N/A
ENSMUST00000077494 N/A 31.296±6.45 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127959 N/A N/A N/A N/A N/A N/A N/A N/A 42.173±4.74 N/A
ENSMUST00000137182 N/A N/A N/A N/A N/A N/A N/A N/A N/A 44.215±0.00
ENSMUST00000141662 12.567±0.00 N/A 11.267±1.20 48.488±28.12 N/A N/A N/A 5.711±0.00 6.769±0.00 27.316±0.69
ENSMUST00000149277 N/A N/A N/A N/A N/A N/A N/A N/A 14.602±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005905 IEA coated pit
GO:0007283 IMP spermatogenesis
GO:0019799 IDA tubulin N-acetyltransferase activity
GO:0021542 IMP dentate gyrus development
GO:0030054 IEA cell junction
GO:0042995 IEA cell projection
GO:0045598 IMP regulation of fat cell differentiation
GO:0048666 IEA neuron development
GO:0050662 IEA coenzyme binding
GO:0070507 IEA regulation of microtubule cytoskeleton organization
GO:0071929 IMP alpha-tubulin acetylation
GO:0072686 IEA mitotic spindle
GO:0097427 IDA microtubule bundle
GO:1900227 IMP positive regulation of NLRP3 inflammasome complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004472 atat1 alpha tubulin acetyltransferase 1 protein_coding Danio_rerio
ENSG00000137343 ATAT1 alpha tubulin acetyltransferase 1 protein_coding Homo_sapiens

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