C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alpha tubulin acetyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000056034 Atat1-005 ENSMUSG00000024426 10090 - 17:35899852-35910045 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryTestisENSMUST00000056034
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Testis
ENSMUST00000056034 10.595±3.37 20.458±4.52 74.167±46.99 13.289±0.91 12.727±0.00 9.656±2.45 8.100±1.04 15.925±2.16 24.134±2.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005905 IEA coated pit
GO:0007283 IMP spermatogenesis
GO:0019799 IDA tubulin N-acetyltransferase activity
GO:0021542 IMP dentate gyrus development
GO:0030054 IEA cell junction
GO:0042995 IEA cell projection
GO:0045598 IMP regulation of fat cell differentiation
GO:0048666 IEA neuron development
GO:0070507 IEA regulation of microtubule cytoskeleton organization
GO:0071929 IMP alpha-tubulin acetylation
GO:0097427 IDA microtubule bundle
GO:1900227 IMP positive regulation of NLRP3 inflammasome complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318999 ATAT1-001 protein_coding Homo_sapiens 0 1114
ENST00000319027 ATAT1-005 protein_coding Homo_sapiens 0 1166
ENST00000329992 ATAT1-006 protein_coding Homo_sapiens 0 725
ENST00000330083 ATAT1-004 protein_coding Homo_sapiens 0 556
ENST00000376483 ATAT1-003 protein_coding Homo_sapiens 0 743
ENST00000376485 ATAT1-002 protein_coding Homo_sapiens 0 743
ENST00000383582 ATAT1-004 protein_coding Homo_sapiens 0 556
ENST00000383583 ATAT1-006 protein_coding Homo_sapiens 0 725
ENST00000383584 ATAT1-001 protein_coding Homo_sapiens 0 1114
ENST00000383585 ATAT1-002 protein_coding Homo_sapiens 0 743
ENST00000400575 ATAT1-003 protein_coding Homo_sapiens 0 743
ENST00000400576 ATAT1-005 protein_coding Homo_sapiens 0 1166
ENST00000411724 ATAT1-003 protein_coding Homo_sapiens 0 743
ENST00000416435 ATAT1-004 protein_coding Homo_sapiens 0 556
ENST00000416917 ATAT1-001 protein_coding Homo_sapiens 0 1114
ENST00000417183 ATAT1-001 protein_coding Homo_sapiens 0 1114
ENST00000418248 ATAT1-003 protein_coding Homo_sapiens 0 743
ENST00000420586 ATAT1-002 protein_coding Homo_sapiens 0 743
ENST00000423338 ATAT1-001 protein_coding Homo_sapiens 0 1114
ENST00000423654 ATAT1-003 protein_coding Homo_sapiens 0 743
ENST00000424121 ATAT1-005 protein_coding Homo_sapiens 0 1166
ENST00000425448 ATAT1-004 protein_coding Homo_sapiens 0 556
ENST00000428764 ATAT1-006 protein_coding Homo_sapiens 0 725
ENST00000430611 ATAT1-005 protein_coding Homo_sapiens 0 1166
ENST00000432356 ATAT1-002 protein_coding Homo_sapiens 0 743
ENST00000432643 ATAT1-004 protein_coding Homo_sapiens 0 556
ENST00000442844 ATAT1-002 protein_coding Homo_sapiens 0 743
ENST00000443114 ATAT1-001 protein_coding Homo_sapiens 0 1114
ENST00000443391 ATAT1-005 protein_coding Homo_sapiens 0 1166
ENST00000445486 ATAT1-002 protein_coding Homo_sapiens 0 743
ENST00000445973 ATAT1-005 protein_coding Homo_sapiens 0 1166
ENST00000446100 ATAT1-003 protein_coding Homo_sapiens 0 743
ENST00000448670 ATAT1-004 protein_coding Homo_sapiens 0 556
ENST00000449905 ATAT1-001 protein_coding Homo_sapiens 0 1114
ENST00000450003 ATAT1-006 protein_coding Homo_sapiens 0 725
ENST00000450220 ATAT1-006 protein_coding Homo_sapiens 0 725
ENST00000454794 ATAT1-002 protein_coding Homo_sapiens 0 743
ENST00000454987 ATAT1-005 protein_coding Homo_sapiens 0 1166
ENST00000456215 ATAT1-006 protein_coding Homo_sapiens 0 725
ENST00000456704 ATAT1-006 protein_coding Homo_sapiens 0 725
ENST00000457161 ATAT1-003 protein_coding Homo_sapiens 0 743
ENST00000457334 ATAT1-004 protein_coding Homo_sapiens 0 556
ENST00000462304 ATAT1-010 processed_transcript Homo_sapiens 0 215
ENST00000462795 ATAT1-008 retained_intron Homo_sapiens 0 676
ENST00000463945 ATAT1-010 processed_transcript Homo_sapiens 0 215
ENST00000464565 ATAT1-007 retained_intron Homo_sapiens 0 667
ENST00000466585 ATAT1-007 retained_intron Homo_sapiens 0 667
ENST00000467417 ATAT1-007 retained_intron Homo_sapiens 0 667
ENST00000468199 ATAT1-008 retained_intron Homo_sapiens 0 676
ENST00000468478 ATAT1-008 retained_intron Homo_sapiens 0 676
ENST00000468713 ATAT1-012 processed_transcript Homo_sapiens 0 712
ENST00000471782 ATAT1-007 retained_intron Homo_sapiens 0 667
ENST00000472552 ATAT1-012 processed_transcript Homo_sapiens 0 712
ENST00000472887 ATAT1-010 processed_transcript Homo_sapiens 0 215
ENST00000475631 ATAT1-007 retained_intron Homo_sapiens 0 667
ENST00000477838 ATAT1-012 processed_transcript Homo_sapiens 0 712
ENST00000478297 ATAT1-010 processed_transcript Homo_sapiens 0 215
ENST00000479580 ATAT1-012 processed_transcript Homo_sapiens 0 712
ENST00000481270 ATAT1-007 retained_intron Homo_sapiens 0 667
ENST00000481303 ATAT1-012 processed_transcript Homo_sapiens 0 712
ENST00000482394 ATAT1-008 retained_intron Homo_sapiens 0 676
ENST00000485442 ATAT1-007 retained_intron Homo_sapiens 0 667
ENST00000489189 ATAT1-012 processed_transcript Homo_sapiens 0 712
ENST00000490845 ATAT1-012 processed_transcript Homo_sapiens 0 712
ENST00000491201 ATAT1-010 processed_transcript Homo_sapiens 0 215
ENST00000491620 ATAT1-010 processed_transcript Homo_sapiens 0 215
ENST00000493388 ATAT1-008 retained_intron Homo_sapiens 0 676
ENST00000493986 ATAT1-008 retained_intron Homo_sapiens 0 676
ENST00000494952 ATAT1-008 retained_intron Homo_sapiens 0 676
ENST00000496415 ATAT1-010 processed_transcript Homo_sapiens 0 215

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