C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alpha tubulin acetyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137343 ATAT1 9606 + 6:30626842-30646823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318999 ATAT1-001 30626842-30644679 protein_coding
  ENST00000319027 ATAT1-005 30626875-30644679 protein_coding
  ENST00000329992 ATAT1-006 30626886-30644679 protein_coding
  ENST00000330083 ATAT1-004 30626886-30646823 protein_coding
  ENST00000376483 ATAT1-003 30626876-30644679 protein_coding
  ENST00000376485 ATAT1-002 30626856-30646823 protein_coding
  ENST00000462304 ATAT1-010 30628400-30646402 processed_transcript
  ENST00000468713 ATAT1-012 30626893-30646823 processed_transcript
  ENST00000471782 ATAT1-007 30626920-30646823 retained_intron
  ENST00000479562 ATAT1-009 30641822-30646823 retained_intron
  ENST00000493388 ATAT1-008 30626915-30640698 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318999ENST00000319027ENST00000329992ENST00000330083ENST00000376483ENST00000376485ENST00000468713ENST00000471782ENST00000479562ENST00000493388
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318999 N/A N/A 0.091±0.00 0.543±0.00 0.649±0.00 N/A N/A N/A N/A N/A N/A 2.258±0.00 N/A N/A
ENST00000319027 N/A N/A N/A 4.007±0.00 N/A N/A 0.182±0.00 N/A N/A N/A 0.075±0.00 N/A 0.321±0.00 N/A
ENST00000329992 0.510±0.00 N/A N/A 5.621±3.76 0.326±0.00 0.358±0.00 0.316±0.00 0.317±0.00 N/A 0.625±0.00 N/A N/A 0.597±0.00 0.832±0.00
ENST00000330083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A
ENST00000376483 0.285±0.00 1.373±0.00 0.054±0.00 1.405±1.16 0.617±0.21 0.432±0.00 0.377±0.00 2.773±0.00 0.478±0.00 0.416±0.29 N/A 2.858±1.35 0.182±0.00 5.044±3.42
ENST00000376485 N/A N/A N/A N/A N/A 0.825±0.00 N/A N/A 0.597±0.00 1.028±0.00 N/A 1.787±0.00 1.394±0.68 N/A
ENST00000468713 0.508±0.00 N/A N/A N/A 0.857±0.00 0.608±0.00 N/A N/A N/A N/A N/A N/A 1.156±0.00 2.111±0.00
ENST00000471782 0.241±0.00 N/A 0.158±0.00 N/A 1.011±0.00 N/A 0.250±0.00 1.017±0.68 N/A N/A N/A 1.399±0.00 N/A N/A
ENST00000479562 N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A 0.686±0.00 N/A N/A
ENST00000493388 N/A N/A 0.463±0.00 N/A N/A 0.590±0.00 N/A N/A N/A 0.799±0.24 1.905±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005905 IEA coated pit
GO:0007283 IEA spermatogenesis
GO:0019799 IMP:IEA tubulin N-acetyltransferase activity
GO:0021542 IEA dentate gyrus development
GO:0030054 IEA cell junction
GO:0042995 IEA cell projection
GO:0045598 IEA regulation of fat cell differentiation
GO:0048666 IEA neuron development
GO:0050662 IDA coenzyme binding
GO:0070507 IEA regulation of microtubule cytoskeleton organization
GO:0071929 IDA:IEA alpha-tubulin acetylation
GO:0072686 IDA mitotic spindle
GO:0097427 IEA microtubule bundle
GO:1900227 IEA positive regulation of NLRP3 inflammasome complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004472 atat1 alpha tubulin acetyltransferase 1 protein_coding Danio_rerio
ENSMUSG00000024426 Atat1 alpha tubulin acetyltransferase 1 protein_coding Mus_musculus

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