C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: membrane-spanning 4-domains, subfamily A, member 4C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024675 Ms4a4c 10090 + 19:11404770-11427246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072729 Ms4a4c-001 11407661-11427246 protein_coding
  ENSMUST00000119366 Ms4a4c-005 11414841-11426468 protein_coding
  ENSMUST00000153546 Ms4a4c-004 11404770-11416419 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072729ENSMUST00000119366ENSMUST00000153546
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072729 0.426±0.20 0.304±0.13 0.034±0.01 3.456±0.64 0.192±0.08 0.072±0.07 0.506±0.45 0.412±0.29 0.981±0.17 0.151±0.24 0.205±0.10 0.089±0.05 0.061±0.05
ENSMUST00000119366 N/A 0.104±0.00 N/A N/A 0.160±0.00 N/A 0.136±0.00 0.138±0.05 N/A 0.231±0.21 0.304±0.14 0.107±0.04 0.131±0.00
ENSMUST00000153546 1.415±0.67 0.713±0.17 0.020±0.00 4.013±1.44 0.667±0.00 0.548±0.04 0.730±0.59 0.773±0.36 1.540±0.00 0.054±0.00 0.975±0.30 0.321±0.09 0.159±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LI CIL_0002LI_000N CGP 19:11375523-11427246
CIL_0002LI CIL_0002LI_000L CGP 19:11404770-11463549

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007018 ms4a17a.6 membrane-spanning 4-domains, subfamily A, member 17A.6 protein_coding Danio_rerio
ENSDARG00000014024 ms4a17a.4 membrane-spanning 4-domains, subfamily A, member 17A.4 protein_coding Danio_rerio
ENSDARG00000020548 si:dkey-77f5.10 si:dkey-77f5.10 protein_coding Danio_rerio
ENSDARG00000028659 ms4a17c.2 membrane-spanning 4-domains, subfamily A, member 17c.2 protein_coding Danio_rerio
ENSDARG00000043796 ms4a17a.7 membrane-spanning 4-domains, subfamily A, member 17A.7 protein_coding Danio_rerio
ENSDARG00000043798 ms4a17a.1 membrane-spanning 4-domains, subfamily A, member 17A.1 protein_coding Danio_rerio
ENSDARG00000043802 ms4a17a.9 membrane-spanning 4-domains, subfamily A, member 17A.9 protein_coding Danio_rerio
ENSDARG00000053561 ms4a17a.11 membrane-spanning 4-domains, subfamily A, member 17A.11 protein_coding Danio_rerio
ENSDARG00000053563 si:ch73-56d11.4 si:ch73-56d11.4 protein_coding Danio_rerio
ENSDARG00000054898 ms4a17a.17 membrane-spanning 4-domains, subfamily A, member 17A.17 protein_coding Danio_rerio
ENSDARG00000091970 ms4a17a.3 membrane-spanning 4-domains, subfamily A, member 17A.3 protein_coding Danio_rerio
ENSDARG00000092204 ms4a17a.5 membrane-spanning 4-domains, subfamily A, member 17A.5 protein_coding Danio_rerio
ENSDARG00000092593 si:dkey-174k12.3 si:dkey-174k12.3 protein_coding Danio_rerio
ENSDARG00000093512 si:dkey-238j22.1 si:dkey-238j22.1 protein_coding Danio_rerio
ENSDARG00000093546 ms4a17a.2 membrane-spanning 4-domains, subfamily A, member 17a.2 protein_coding Danio_rerio
ENSDARG00000093910 FP015791.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094643 ms4a17c.1 membrane-spanning 4-domains, subfamily A, member 17C.1 protein_coding Danio_rerio
ENSDARG00000094809 ms4a17a.14 membrane-spanning 4-domains, subfamily A, member 17A.14 protein_coding Danio_rerio
ENSDARG00000094854 ms4a17a.8 membrane-spanning 4-domains, subfamily A, member 17A.8 protein_coding Danio_rerio
ENSDARG00000095695 ms4a17a.10 membrane-spanning 4-domains, subfamily A, member 17A.10 protein_coding Danio_rerio
ENSDARG00000097527 si:ch73-56d11.3 si:ch73-56d11.3 protein_coding Danio_rerio
ENSG00000110079 MS4A4A membrane-spanning 4-domains, subfamily A, member 4A protein_coding Homo_sapiens
ENSG00000214787 MS4A4E membrane-spanning 4-domains, subfamily A, member 4E protein_coding Homo_sapiens

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