C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: membrane-spanning 4-domains, subfamily A, member 4E
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214787 MS4A4E 9606 - 11:60201253-60243088 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398984 MS4A4E-201 60213089-60230055 protein_coding
  ENST00000398986 MS4A4E-202 60206673-60230071 protein_coding
  ENST00000425663 MS4A4E-002 60213089-60230055 protein_coding
  ENST00000526086 MS4A4E-004 60213095-60230055 protein_coding
  ENST00000526153 MS4A4E-005 60213089-60230044 nonsense_mediated_decay
  ENST00000528394 MS4A4E-003 60213095-60230055 protein_coding
  ENST00000532442 MS4A4E-001 60201253-60243088 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398986ENST00000425663ENST00000526086ENST00000532442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398986 0.737±0.00 0.739±0.00 N/A N/A N/A N/A 0.263±0.00 0.488±0.00 0.234±0.00 0.541±0.00 N/A 0.332±0.00 0.095±0.00 N/A
ENST00000425663 N/A N/A N/A N/A N/A N/A N/A 0.252±0.00 N/A N/A N/A N/A N/A N/A
ENST00000526086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A N/A
ENST00000532442 0.583±0.00 1.696±0.00 0.364±0.00 0.468±0.43 0.956±0.00 0.877±0.00 N/A 0.415±0.12 N/A 0.486±0.00 0.209±0.00 0.423±0.17 0.377±0.08 1.089±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MQ CIL_0002MQ_0001 CGP 11:60172014-60243088
CIL_0002LI CIL_0002LI_000K CGP 11:60201253-60308972

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007018 ms4a17a.6 membrane-spanning 4-domains, subfamily A, member 17A.6 protein_coding Danio_rerio
ENSDARG00000014024 ms4a17a.4 membrane-spanning 4-domains, subfamily A, member 17A.4 protein_coding Danio_rerio
ENSDARG00000020548 si:dkey-77f5.10 si:dkey-77f5.10 protein_coding Danio_rerio
ENSDARG00000028659 ms4a17c.2 membrane-spanning 4-domains, subfamily A, member 17c.2 protein_coding Danio_rerio
ENSDARG00000043796 ms4a17a.7 membrane-spanning 4-domains, subfamily A, member 17A.7 protein_coding Danio_rerio
ENSDARG00000043798 ms4a17a.1 membrane-spanning 4-domains, subfamily A, member 17A.1 protein_coding Danio_rerio
ENSDARG00000043802 ms4a17a.9 membrane-spanning 4-domains, subfamily A, member 17A.9 protein_coding Danio_rerio
ENSDARG00000053561 ms4a17a.11 membrane-spanning 4-domains, subfamily A, member 17A.11 protein_coding Danio_rerio
ENSDARG00000053563 si:ch73-56d11.4 si:ch73-56d11.4 protein_coding Danio_rerio
ENSDARG00000054898 ms4a17a.17 membrane-spanning 4-domains, subfamily A, member 17A.17 protein_coding Danio_rerio
ENSDARG00000091970 ms4a17a.3 membrane-spanning 4-domains, subfamily A, member 17A.3 protein_coding Danio_rerio
ENSDARG00000092204 ms4a17a.5 membrane-spanning 4-domains, subfamily A, member 17A.5 protein_coding Danio_rerio
ENSDARG00000092593 si:dkey-174k12.3 si:dkey-174k12.3 protein_coding Danio_rerio
ENSDARG00000093512 si:dkey-238j22.1 si:dkey-238j22.1 protein_coding Danio_rerio
ENSDARG00000093546 ms4a17a.2 membrane-spanning 4-domains, subfamily A, member 17a.2 protein_coding Danio_rerio
ENSDARG00000093910 FP015791.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094643 ms4a17c.1 membrane-spanning 4-domains, subfamily A, member 17C.1 protein_coding Danio_rerio
ENSDARG00000094809 ms4a17a.14 membrane-spanning 4-domains, subfamily A, member 17A.14 protein_coding Danio_rerio
ENSDARG00000094854 ms4a17a.8 membrane-spanning 4-domains, subfamily A, member 17A.8 protein_coding Danio_rerio
ENSDARG00000095695 ms4a17a.10 membrane-spanning 4-domains, subfamily A, member 17A.10 protein_coding Danio_rerio
ENSDARG00000097527 si:ch73-56d11.3 si:ch73-56d11.3 protein_coding Danio_rerio
ENSMUSG00000024675 Ms4a4c membrane-spanning 4-domains, subfamily A, member 4C protein_coding Mus_musculus
ENSMUSG00000024678 Ms4a4d membrane-spanning 4-domains, subfamily A, member 4D protein_coding Mus_musculus
ENSMUSG00000056290 Ms4a4b membrane-spanning 4-domains, subfamily A, member 4B protein_coding Mus_musculus
ENSMUSG00000101389 Ms4a4a membrane-spanning 4-domains, subfamily A, member 4A protein_coding Mus_musculus

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