C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: membrane-spanning 4-domains, subfamily A, member 6B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024677 Ms4a6b 10090 + 19:11516512-11531256 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025580 Ms4a6b-201 11518559-11530403 protein_coding
  ENSMUST00000159587 Ms4a6b-003 11518594-11521855 retained_intron
  ENSMUST00000161157 Ms4a6b-002 11518566-11531254 nonsense_mediated_decay
  ENSMUST00000161283 Ms4a6b-004 11521671-11527417 nonsense_mediated_decay
  ENSMUST00000163078 Ms4a6b-001 11516512-11531256 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025580ENSMUST00000159587ENSMUST00000161157ENSMUST00000161283ENSMUST00000163078
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025580 2.945±0.89 2.472±0.89 3.537±0.11 0.503±0.10 18.487±3.59 1.532±0.52 1.174±0.46 1.688±1.07 0.972±0.94 3.903±0.34 0.310±0.40 1.337±0.54 0.754±0.66 0.387±0.18
ENSMUST00000159587 N/A N/A N/A 0.239±0.00 N/A 1.295±0.00 1.399±0.00 N/A 1.441±1.07 N/A N/A 3.361±2.15 1.522±0.00 0.627±0.00
ENSMUST00000161157 0.517±0.07 0.362±0.08 0.909±0.00 0.029±0.00 3.361±0.99 0.315±0.08 N/A 0.402±0.25 0.214±0.20 1.045±0.34 0.050±0.01 0.331±0.20 0.076±0.05 0.077±0.05
ENSMUST00000161283 N/A N/A N/A N/A N/A N/A N/A N/A 0.488±0.15 N/A N/A 3.110±0.00 N/A N/A
ENSMUST00000163078 0.835±0.00 1.251±0.20 0.783±0.00 N/A 6.341±0.96 1.159±0.34 N/A 0.425±0.00 0.298±0.21 0.995±0.01 0.047±0.01 0.889±0.19 0.261±0.16 0.204±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MQ CIL_0002MQ_0002 CGP 19:11516512-11558467

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000110077 MS4A6A membrane-spanning 4-domains, subfamily A, member 6A protein_coding Homo_sapiens
ENSG00000166926 MS4A6E membrane-spanning 4-domains, subfamily A, member 6E protein_coding Homo_sapiens

Loading