C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002MQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110077-ENSG00000214787 CGP 9606 11:60172014-60243088
GeneTranscriptPositionBiotype
ENSG00000110077 (MS4A6A)
membrane-spanning 4-domains, subfamily A, member 6A 		ENST00000412309 (MS4A6A-006) 60172497-60183223 protein_coding
ENST00000420732 (MS4A6A-003) 60172015-60183040 protein_coding
ENST00000426738 (MS4A6A-201) 60172500-60184666 protein_coding
ENST00000525549 (MS4A6A-012) 60177979-60183030 retained_intron
ENST00000526677 (MS4A6A-007) 60179491-60183142 retained_intron
ENST00000526697 (MS4A6A-010) 60182805-60183743 retained_intron
ENST00000527254 (MS4A6A-020) 60173028-60183067 nonsense_mediated_decay
ENST00000528851 (MS4A6A-002) 60172014-60183104 protein_coding
ENST00000528925 (MS4A6A-008) 60183170-60184666 processed_transcript
ENST00000529054 (MS4A6A-004) 60172047-60184633 protein_coding
ENST00000529906 (MS4A6A-015) 60177019-60179965 processed_transcript
ENST00000530179 (MS4A6A-017) 60178171-60183083 retained_intron
ENST00000530839 (MS4A6A-001) 60172015-60184666 protein_coding
ENST00000531531 (MS4A6A-016) 60181581-60184513 protein_coding
ENST00000531914 (MS4A6A-019) 60172020-60178353 retained_intron
ENST00000532169 (MS4A6A-005) 60179491-60184418 protein_coding
ENST00000533023 (MS4A6A-014) 60172671-60183031 protein_coding
ENST00000533409 (MS4A6A-009) 60181659-60183966 protein_coding
ENST00000533660 (MS4A6A-011) 60181412-60182558 retained_intron
ENST00000533989 (MS4A6A-018) 60172019-60181666 protein_coding
ENST00000534596 (MS4A6A-013) 60179894-60184420 protein_coding
ENSG00000275344 (MIR6503)
microRNA 6503 		ENST00000622884 (MIR6503-201) 60209071-60209156 miRNA
CIL_0002MQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024677-ENSMUSG00000024678 CGP 10090 19:11516512-11558467
GeneTranscriptPositionBiotype
ENSMUSG00000024677 (Ms4a6b)
membrane-spanning 4-domains, subfamily A, member 6B 		ENSMUST00000025580 (Ms4a6b-201) 11518559-11530403 protein_coding
ENSMUST00000159587 (Ms4a6b-003) 11518594-11521855 retained_intron
ENSMUST00000161157 (Ms4a6b-002) 11518566-11531254 nonsense_mediated_decay
ENSMUST00000161283 (Ms4a6b-004) 11521671-11527417 nonsense_mediated_decay
ENSMUST00000163078 (Ms4a6b-001) 11516512-11531256 protein_coding
ENSMUSG00000024678 (Ms4a4d)
membrane-spanning 4-domains, subfamily A, member 4D 		ENSMUST00000025581 (Ms4a4d-001) 11536801-11558467 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MQ_0001ENSG00000110077ENST00000412309ENST00000420732ENST00000426738ENST00000525549ENST00000526677ENST00000526697ENST00000527254ENST00000528851ENST00000528925ENST00000529054ENST00000529906ENST00000530179ENST00000530839ENST00000531531ENST00000531914ENST00000532169ENST00000533023ENST00000533409ENST00000533660ENST00000533989ENST00000534596ENSG00000275344ENST00000622884CIL_0002MQ_0002ENSMUSG00000024677ENSMUST00000025580ENSMUST00000159587ENSMUST00000161157ENSMUST00000161283ENSMUST00000163078ENSMUSG00000024678ENSMUST00000025581
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MQ_0001ENSG00000110077ENST00000412309ENST00000420732ENST00000526677ENST00000526697ENST00000527254ENST00000528851ENST00000530179ENST00000530839ENST00000531914ENST00000533023ENSG00000275344ENST00000622884CIL_0002MQ_0002ENSMUSG00000024677ENSMUST00000025580ENSMUST00000159587ENSMUST00000161157ENSMUST00000161283ENSMUST00000163078ENSMUSG00000024678ENSMUST00000025581
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110077 ENST00000412309 4.512±0.00 7.907±0.00 N/A 0.361±0.00 6.694±0.00 1.773±0.00 3.868±0.00 4.420±0.54 9.492±0.00 3.957±0.00 0.263±0.00 2.604±0.96 12.728±0.07 2.790±0.00
ENST00000420732 8.547±0.00 7.063±0.00 1.568±0.00 0.867±0.00 15.272±0.00 5.284±3.58 7.876±0.00 11.517±6.37 16.759±0.00 13.330±6.66 2.636±0.00 6.065±2.58 23.913±1.39 N/A
ENST00000426738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526677 N/A N/A N/A 0.215±0.11 1.526±0.00 N/A 0.757±0.00 1.455±0.00 2.937±0.00 N/A N/A 1.814±0.00 N/A N/A
ENST00000526697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.418±0.00 N/A N/A N/A
ENST00000527254 9.338±0.00 N/A N/A N/A 6.116±0.00 N/A 7.930±0.00 N/A 9.131±0.00 6.060±0.00 1.108±0.00 N/A 11.155±0.69 N/A
ENST00000528851 1.795±0.00 3.760±0.00 N/A N/A 3.895±0.00 2.087±0.71 N/A 2.416±0.00 4.025±0.96 1.689±0.00 0.247±0.05 2.101±0.17 4.961±0.98 2.023±0.00
ENST00000528925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530179 N/A N/A N/A 1.971±1.08 N/A N/A N/A N/A N/A N/A N/A 5.436±0.00 17.233±0.00 N/A
ENST00000530839 N/A N/A 0.540±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.098±0.00 11.258±0.00 0.650±0.00
ENST00000531531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531914 N/A 16.468±0.00 2.114±0.00 1.560±1.02 9.623±3.04 1.945±0.00 N/A 8.691±0.00 12.917±0.00 N/A 0.860±0.00 7.630±0.45 14.486±0.72 5.141±0.00
ENST00000532169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533023 N/A N/A N/A 1.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275344 ENST00000622884 N/A N/A N/A N/A 1.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024677 ENSMUST00000025580 2.945±0.89 2.472±0.89 3.537±0.11 0.503±0.10 18.487±3.59 1.532±0.52 1.174±0.46 1.688±1.07 0.972±0.94 3.903±0.34 0.310±0.40 1.337±0.54 0.754±0.66 0.387±0.18
ENSMUST00000159587 N/A N/A N/A 0.239±0.00 N/A 1.295±0.00 1.399±0.00 N/A 1.441±1.07 N/A N/A 3.361±2.15 1.522±0.00 0.627±0.00
ENSMUST00000161157 0.517±0.07 0.362±0.08 0.909±0.00 0.029±0.00 3.361±0.99 0.315±0.08 N/A 0.402±0.25 0.214±0.20 1.045±0.34 0.050±0.01 0.331±0.20 0.076±0.05 0.077±0.05
ENSMUST00000161283 N/A N/A N/A N/A N/A N/A N/A N/A 0.488±0.15 N/A N/A 3.110±0.00 N/A N/A
ENSMUST00000163078 0.835±0.00 1.251±0.20 0.783±0.00 N/A 6.341±0.96 1.159±0.34 N/A 0.425±0.00 0.298±0.21 0.995±0.01 0.047±0.01 0.889±0.19 0.261±0.16 0.204±0.00
ENSMUSG00000024678 ENSMUST00000025581 13.711±1.51 7.391±0.31 15.360±4.88 0.025±0.02 19.345±2.30 11.094±4.82 7.289±1.29 1.513±0.26 2.006±1.89 24.341±8.47 1.774±0.31 12.843±5.60 0.476±0.64 0.555±0.43

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