C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: membrane-spanning 4-domains, subfamily A, member 6D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024679 Ms4a6d 10090 - 19:11586604-11604849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025582 Ms4a6d-001 11586604-11604849 protein_coding
  ENSMUST00000125291 Ms4a6d-004 11586987-11593155 protein_coding
  ENSMUST00000135351 Ms4a6d-002 11587964-11593015 retained_intron
  ENSMUST00000155669 Ms4a6d-003 11586980-11593373 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025582ENSMUST00000125291ENSMUST00000135351ENSMUST00000155669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025582 3.325±0.99 1.508±0.50 2.614±0.35 0.445±0.23 2.909±0.72 1.353±0.30 0.823±0.14 0.280±0.10 1.801±1.49 2.453±0.62 0.209±0.08 1.620±0.56 0.992±0.84 0.211±0.13
ENSMUST00000125291 1.207±0.00 0.302±0.00 N/A N/A N/A N/A N/A 0.356±0.00 N/A N/A 0.089±0.00 0.499±0.05 N/A 0.110±0.06
ENSMUST00000135351 N/A 2.420±1.18 N/A N/A 2.947±1.58 N/A N/A 0.221±0.04 0.401±0.02 1.658±0.04 N/A 1.966±1.34 N/A 0.421±0.00
ENSMUST00000155669 N/A N/A N/A 0.307±0.00 N/A 0.268±0.00 N/A 0.089±0.01 0.357±0.00 N/A 0.135±0.01 1.684±0.00 N/A 0.202±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MR CIL_0002MR_0002 CGP 19:11536801-11604849

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000110077 MS4A6A membrane-spanning 4-domains, subfamily A, member 6A protein_coding Homo_sapiens
ENSG00000166926 MS4A6E membrane-spanning 4-domains, subfamily A, member 6E protein_coding Homo_sapiens

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