C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: autophagy related 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024773 Atg2a 10090 + 19:6241668-6262335 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045351 Atg2a-001 6241668-6262335 protein_coding
  ENSMUST00000135018 Atg2a-004 6251488-6252295 retained_intron
  ENSMUST00000143053 Atg2a-005 6258341-6260132 retained_intron
  ENSMUST00000145600 Atg2a-002 6245465-6262295 protein_coding
  ENSMUST00000151079 Atg2a-003 6256371-6259619 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045351ENSMUST00000145600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045351 6.011±0.31 14.035±0.57 2.848±0.54 3.123±0.53 9.860±2.44 10.863±0.64 3.729±0.45 4.534±0.65 3.592±1.73 6.964±0.90 3.717±0.68 9.607±3.08 5.171±2.84 7.401±2.32
ENSMUST00000145600 6.901±1.04 11.902±0.33 2.352±0.34 3.993±0.41 10.802±2.42 8.709±1.05 4.272±0.50 5.474±0.75 3.568±1.65 6.020±0.23 1.594±0.35 7.517±2.88 3.178±1.44 6.433±0.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IBA autophagic vacuole assembly
GO:0000407 IBA pre-autophagosomal structure
GO:0000422 IBA mitochondrion degradation
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005811 IEA lipid particle
GO:0006995 IBA cellular response to nitrogen starvation
GO:0019898 IBA extrinsic component of membrane
GO:0044804 IBA nucleophagy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087010 ATG2A autophagy related 2A protein_coding Danio_rerio
ENSG00000110046 ATG2A autophagy related 2A protein_coding Homo_sapiens

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