C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: autophagy related 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110046 ATG2A 9606 - 11:64894546-64917248 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377264 ATG2A-001 64894546-64917248 protein_coding
  ENST00000418259 ATG2A-004 64894546-64913395 protein_coding
  ENST00000421419 ATG2A-201 64894572-64917211 protein_coding
  ENST00000461701 ATG2A-003 64912611-64917206 retained_intron
  ENST00000461955 ATG2A-006 64914196-64917206 retained_intron
  ENST00000472525 ATG2A-005 64897040-64897730 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377264ENST00000418259ENST00000421419ENST00000461701
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377264 3.267±0.00 N/A N/A 2.346±1.59 1.079±0.50 0.800±0.64 1.943±0.00 1.111±0.00 0.791±0.47 0.516±0.31 N/A 2.041±1.91 2.061±1.02 1.761±0.59
ENST00000418259 3.680±0.00 4.415±0.00 1.027±0.00 2.286±0.00 1.851±1.71 0.799±0.28 0.867±0.74 2.808±2.30 4.850±0.00 4.183±0.00 2.352±0.07 4.893±1.42 3.181±0.51 3.836±0.00
ENST00000421419 N/A 5.452±0.00 N/A N/A 3.571±0.00 N/A N/A 5.212±0.00 4.385±0.00 4.432±0.00 N/A 5.135±0.00 3.716±0.52 3.583±0.00
ENST00000461701 N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IBA autophagic vacuole assembly
GO:0000407 IBA pre-autophagosomal structure
GO:0000422 IBA mitochondrion degradation
GO:0005515 IPI protein binding
GO:0005811 IEA lipid particle
GO:0006995 IBA cellular response to nitrogen starvation
GO:0019898 IBA extrinsic component of membrane
GO:0044804 IBA nucleophagy

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087010 ATG2A autophagy related 2A protein_coding Danio_rerio
ENSMUSG00000024773 Atg2a autophagy related 2A protein_coding Mus_musculus

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