C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: autophagy related 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045351 Atg2a-001 ENSMUSG00000024773 10090 + 19:6241668-6262335 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045351 6.011±0.31 14.035±0.57 2.848±0.54 3.123±0.53 9.860±2.44 10.863±0.64 3.729±0.45 4.534±0.65 3.592±1.73 6.964±0.90 3.717±0.68 9.607±3.08 5.171±2.84 7.401±2.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IBA autophagic vacuole assembly
GO:0000407 IBA pre-autophagosomal structure
GO:0000422 IBA mitochondrion degradation
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005811 IEA lipid particle
GO:0006995 IBA cellular response to nitrogen starvation
GO:0019898 IBA extrinsic component of membrane
GO:0044804 IBA nucleophagy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000130430 ATG2A-201 protein_coding Danio_rerio 9e-21 108
ENST00000377264 ATG2A-001 protein_coding Homo_sapiens 0 2924
ENST00000418259 ATG2A-004 protein_coding Homo_sapiens 0 2896
ENST00000421419 ATG2A-201 protein_coding Homo_sapiens 0 689
ENST00000461701 ATG2A-003 retained_intron Homo_sapiens 0 320
ENST00000461955 ATG2A-006 retained_intron Homo_sapiens 0 320

Loading