C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: STAM binding protein like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024776 Stambpl1 10090 + 19:34192229-34240333 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054956 Stambpl1-001 34192229-34240333 protein_coding
  ENSMUST00000119603 Stambpl1-003 34217624-34240331 protein_coding
  ENSMUST00000125232 Stambpl1-002 34217434-34235862 retained_intron
  ENSMUST00000129535 Stambpl1-004 34192822-34231442 protein_coding
  ENSMUST00000130756 Stambpl1-005 34232706-34234299 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054956ENSMUST00000119603ENSMUST00000125232ENSMUST00000130756
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054956 3.408±0.58 1.941±0.63 1.619±0.11 4.403±2.01 2.970±0.71 0.801±0.31 0.595±0.04 0.821±0.52 2.477±0.51 0.174±0.04 2.102±0.98 1.968±0.42 N/A
ENSMUST00000119603 N/A N/A 3.147±0.00 4.658±0.00 N/A 0.853±0.00 0.379±0.00 0.292±0.21 N/A 0.233±0.11 1.920±0.84 2.267±0.94 7.926±3.68
ENSMUST00000125232 N/A N/A N/A 0.653±0.00 N/A N/A 0.083±0.01 0.087±0.03 N/A 0.019±0.01 0.209±0.05 N/A N/A
ENSMUST00000130756 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.222±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RY CIL_0001RY_0002 CGP 19:34122549-34240333
CIL_0001IX CIL_0001IX_0002 CGP 19:34192229-34255336

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008237 IEA metallopeptidase activity
GO:0016020 IEA membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003085 stambpl1 STAM binding protein-like 1 protein_coding Danio_rerio
ENSG00000138134 STAMBPL1 STAM binding protein-like 1 protein_coding Homo_sapiens

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