C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: STAM binding protein-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138134 STAMBPL1 9606 + 10:88879734-88975153 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000371922 STAMBPL1-004 88912356-88923487 protein_coding
  ENST00000371924 STAMBPL1-003 88901075-88923487 protein_coding
  ENST00000371926 STAMBPL1-001 88879734-88923487 protein_coding
  ENST00000371927 STAMBPL1-002 88879734-88975153 protein_coding
  ENST00000461650 STAMBPL1-005 88880224-88893913 processed_transcript
  ENST00000468698 STAMBPL1-006 88882083-88882857 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371922ENST00000371924ENST00000371926ENST00000371927
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371922 0.080±0.00 1.267±0.00 N/A 0.716±0.00 1.888±0.00 0.298±0.00 0.172±0.00 0.194±0.02 N/A 0.845±0.00 0.118±0.04 1.506±0.25 0.220±0.00 N/A
ENST00000371924 N/A N/A N/A N/A 0.203±0.00 0.986±0.00 N/A N/A 0.399±0.00 1.228±0.00 N/A 1.483±0.00 N/A N/A
ENST00000371926 0.389±0.00 2.484±0.00 0.157±0.00 3.085±0.33 0.893±0.00 1.448±0.00 0.358±0.00 0.366±0.00 0.404±0.00 2.130±0.00 N/A 9.753±6.92 1.230±0.68 17.672±10.47
ENST00000371927 0.050±0.00 N/A 0.069±0.00 N/A 0.121±0.00 N/A 0.073±0.01 0.048±0.00 0.239±0.00 N/A 0.016±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RY CIL_0001RY_0001 CGP 10:88822132-88975153
CIL_0001IX CIL_0001IX_0001 CGP 10:88879734-88991390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008237 IEA metallopeptidase activity
GO:0016020 IDA membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003085 stambpl1 STAM binding protein-like 1 protein_coding Danio_rerio
ENSMUSG00000024776 Stambpl1 STAM binding protein like 1 protein_coding Mus_musculus

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