C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: barrier to autointegration factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024844 Banf1 10090 - 19:5364641-5366645 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025762 Banf1-201 5364641-5366645 protein_coding
  ENSMUST00000170010 Banf1-202 5364641-5366347 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025762ENSMUST00000170010
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025762 63.381±9.19 57.744±19.35 82.588±11.59 65.968±41.15 70.291±28.74 57.531±8.14 67.900±7.98 63.808±8.58 88.710±55.78 51.822±1.70 96.951±5.89 81.087±19.04 85.741±51.31 41.063±18.31
ENSMUST00000170010 N/A N/A N/A N/A 9.298±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.539±4.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0005737 IEA cytoplasm
GO:0015074 IDA DNA integration
GO:0070062 IEA extracellular vesicular exosome
GO:0075713 TAS establishment of integrated proviral latency

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037009 banf1 barrier to autointegration factor 1 protein_coding Danio_rerio
ENSG00000175334 BANF1 barrier to autointegration factor 1 protein_coding Homo_sapiens

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