C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 45, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024993 Fam45a 10090 + 19:60811585-60836227 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025957 Fam45a-001 60811611-60836227 protein_coding
  ENSMUST00000119633 Fam45a-002 60811591-60836227 protein_coding
  ENSMUST00000128357 Fam45a-004 60811585-60830864 protein_coding
  ENSMUST00000136146 Fam45a-006 60812040-60814761 processed_transcript
  ENSMUST00000142375 Fam45a-007 60830552-60835113 retained_intron
  ENSMUST00000147049 Fam45a-003 60811596-60818439 retained_intron
  ENSMUST00000148577 Fam45a-005 60811611-60822406 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025957ENSMUST00000119633ENSMUST00000128357ENSMUST00000142375ENSMUST00000148577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025957 N/A 1.790±0.49 5.042±3.17 4.198±1.95 2.491±0.00 N/A N/A 1.276±0.47 8.213±1.66 N/A 1.240±0.38 3.945±2.30 8.580±4.15 7.966±2.23
ENSMUST00000119633 N/A N/A 3.148±0.65 4.988±0.16 2.833±1.44 1.154±0.00 0.509±0.00 N/A 2.613±0.63 1.760±0.40 0.354±0.06 3.303±1.62 N/A 7.942±3.18
ENSMUST00000128357 4.359±0.00 2.659±0.94 N/A 5.307±0.00 2.876±0.85 4.157±1.53 2.950±0.79 5.082±1.03 2.537±0.64 7.621±0.92 N/A 4.356±0.92 8.316±2.17 13.271±0.22
ENSMUST00000142375 5.909±1.51 1.013±0.11 N/A 9.335±0.00 2.699±1.20 1.505±0.00 N/A N/A N/A N/A N/A 3.165±1.59 6.173±0.00 15.929±0.00
ENSMUST00000148577 N/A N/A N/A N/A N/A N/A N/A 6.586±0.16 3.882±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y7 CIL_0005Y7_0002 CGP 19:60761116-60836227
CIL_0004H3 CIL_0004H3_0003 CGP 19:60811585-60861479

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062965 fam45a family with sequence similarity 45, member A protein_coding Danio_rerio
ENSG00000119979 FAM45A family with sequence similarity 45, member A protein_coding Homo_sapiens

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