C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Y7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107581-ENSG00000119979 CGP 9606 10:119033670-119137984
GeneTranscriptPositionBiotype
ENSG00000107581 (EIF3A)
eukaryotic translation initiation factor 3, subunit A 		ENST00000369144 (EIF3A-001) 119033670-119080804 protein_coding
ENST00000462527 (EIF3A-002) 119056876-119059890 retained_intron
ENST00000541549 (EIF3A-201) 119035793-119080823 protein_coding
ENSG00000119979 (FAM45A)
family with sequence similarity 45, member A 		ENST00000361432 (FAM45A-001) 119104117-119137195 protein_coding
ENST00000448258 (FAM45A-011) 119104117-119129546 processed_transcript
ENST00000462327 (FAM45A-005) 119129475-119135180 processed_transcript
ENST00000472379 (FAM45A-007) 119104086-119105635 retained_intron
ENST00000487888 (FAM45A-010) 119104104-119129612 processed_transcript
ENST00000489936 (FAM45A-002) 119136517-119137174 processed_transcript
ENST00000489988 (FAM45A-003) 119114105-119137984 processed_transcript
ENST00000493766 (FAM45A-009) 119104095-119111928 processed_transcript
ENST00000497903 (FAM45A-006) 119104092-119108096 processed_transcript
ENST00000498549 (FAM45A-004) 119120382-119137180 processed_transcript
ENST00000535029 (FAM45A-201) 119104099-119137703 protein_coding
ENSG00000207468 (SNORA19)
small nucleolar RNA, H/ACA box 19 		ENST00000384737 (SNORA19-201) 119060011-119060138 snoRNA
ENSG00000222588 (SNORA19)
Small nucleolar RNA SNORA19 		ENST00000410656 (SNORA19.1-201) 119060983-119061111 snoRNA
CIL_0005Y7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024991-ENSMUSG00000024993 CGP 10090 19:60761116-60836227
GeneTranscriptPositionBiotype
ENSMUSG00000024991 (Eif3a)
eukaryotic translation initiation factor 3, subunit A 		ENSMUST00000025955 (Eif3a-201) 60761116-60790693 protein_coding
ENSMUSG00000024993 (Fam45a)
family with sequence similarity 45, member A 		ENSMUST00000025957 (Fam45a-001) 60811611-60836227 protein_coding
ENSMUST00000119633 (Fam45a-002) 60811591-60836227 protein_coding
ENSMUST00000128357 (Fam45a-004) 60811585-60830864 protein_coding
ENSMUST00000136146 (Fam45a-006) 60812040-60814761 processed_transcript
ENSMUST00000142375 (Fam45a-007) 60830552-60835113 retained_intron
ENSMUST00000147049 (Fam45a-003) 60811596-60818439 retained_intron
ENSMUST00000148577 (Fam45a-005) 60811611-60822406 nonsense_mediated_decay
ENSMUSG00000089598 (Gm26158)
predicted gene, 26158 		ENSMUST00000158973 (Gm26158-201) 60775521-60775639 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y7_0001ENSG00000107581ENST00000369144ENST00000462527ENST00000541549ENSG00000119979ENST00000361432ENST00000448258ENST00000462327ENST00000472379ENST00000487888ENST00000489936ENST00000489988ENST00000493766ENST00000497903ENST00000498549ENST00000535029ENSG00000207468ENST00000384737ENSG00000222588ENST00000410656CIL_0005Y7_0002ENSMUSG00000024991ENSMUST00000025955ENSMUSG00000024993ENSMUST00000025957ENSMUST00000119633ENSMUST00000128357ENSMUST00000136146ENSMUST00000142375ENSMUST00000147049ENSMUST00000148577ENSMUSG00000089598ENSMUST00000158973
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y7_0001ENSG00000107581ENST00000369144ENST00000541549ENSG00000119979ENST00000361432ENST00000462327ENST00000487888ENST00000489988ENST00000498549ENST00000535029ENSG00000207468ENST00000384737ENSG00000222588ENST00000410656CIL_0005Y7_0002ENSMUSG00000024991ENSMUST00000025955ENSMUSG00000024993ENSMUST00000025957ENSMUST00000119633ENSMUST00000128357ENSMUST00000142375ENSMUST00000148577ENSMUSG00000089598ENSMUST00000158973
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107581 ENST00000369144 14.844±0.00 16.589±0.00 1.025±0.00 5.287±3.66 10.801±6.69 11.283±7.52 2.393±1.09 3.138±0.96 6.399±3.58 6.809±3.96 18.363±16.61 10.963±4.02 8.771±0.44 10.647±6.15
ENST00000462527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541549 19.376±0.00 N/A N/A 8.747±6.33 11.611±2.98 12.825±3.41 12.474±9.11 9.784±4.75 10.768±0.00 7.684±1.56 52.091±0.00 19.580±6.64 21.367±20.77 20.351±8.89
ENSG00000119979 ENST00000361432 N/A N/A 1.527±0.00 4.495±0.00 2.880±0.00 2.018±0.00 0.644±0.00 1.919±0.00 2.243±0.00 0.311±0.00 0.585±0.00 3.777±0.00 N/A N/A
ENST00000448258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462327 N/A 1.308±0.00 N/A N/A N/A N/A N/A N/A N/A 0.226±0.00 0.811±0.00 N/A N/A N/A
ENST00000472379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487888 N/A N/A N/A N/A N/A N/A N/A N/A 1.549±0.00 0.871±0.00 N/A 6.047±0.00 4.092±0.00 2.302±0.00
ENST00000489936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489988 N/A N/A 1.414±0.00 0.826±0.00 0.920±0.00 N/A N/A 0.981±0.17 0.866±0.00 N/A 0.672±0.00 3.261±1.49 N/A N/A
ENST00000493766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498549 N/A N/A N/A N/A 7.612±0.00 9.134±0.00 N/A N/A N/A 2.132±0.00 N/A N/A N/A N/A
ENST00000535029 3.418±0.00 2.361±0.00 N/A 1.486±0.30 3.251±0.00 1.194±0.24 1.368±0.00 2.704±1.65 2.809±0.00 1.547±1.31 2.812±0.00 3.346±0.98 3.157±0.37 1.530±0.57
ENSG00000207468 ENST00000384737 0.322±0.00 0.097±0.00 N/A 30.910±0.00 N/A 0.599±0.00 N/A N/A N/A 40.183±0.00 N/A N/A N/A N/A
ENSG00000222588 ENST00000410656 N/A 0.349±0.00 N/A N/A N/A N/A 0.321±0.00 N/A N/A N/A N/A N/A N/A 0.432±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024991 ENSMUST00000025955 19.287±6.80 20.316±1.52 26.398±2.78 43.562±26.77 15.604±4.57 12.241±1.90 14.575±0.91 15.542±1.83 31.045±18.70 22.943±3.01 19.763±3.92 45.606±54.06 115.667±96.43 30.810±14.13
ENSMUSG00000024993 ENSMUST00000025957 N/A 1.790±0.49 5.042±3.17 4.198±1.95 2.491±0.00 N/A N/A 1.276±0.47 8.213±1.66 N/A 1.240±0.38 3.945±2.30 8.580±4.15 7.966±2.23
ENSMUST00000119633 N/A N/A 3.148±0.65 4.988±0.16 2.833±1.44 1.154±0.00 0.509±0.00 N/A 2.613±0.63 1.760±0.40 0.354±0.06 3.303±1.62 N/A 7.942±3.18
ENSMUST00000128357 4.359±0.00 2.659±0.94 N/A 5.307±0.00 2.876±0.85 4.157±1.53 2.950±0.79 5.082±1.03 2.537±0.64 7.621±0.92 N/A 4.356±0.92 8.316±2.17 13.271±0.22
ENSMUST00000136146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142375 5.909±1.51 1.013±0.11 N/A 9.335±0.00 2.699±1.20 1.505±0.00 N/A N/A N/A N/A N/A 3.165±1.59 6.173±0.00 15.929±0.00
ENSMUST00000147049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148577 N/A N/A N/A N/A N/A N/A N/A 6.586±0.16 3.882±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000089598 ENSMUST00000158973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.961±0.00 N/A

Loading