C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025049 Taf5 10090 + 19:47067748-47083479 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026027 Taf5-201 47067748-47083479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000026027
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000026027 1.504±0.42 1.120±0.39 1.341±0.00 3.029±1.45 2.071±0.74 1.506±0.42 1.465±0.00 3.111±1.96 1.515±0.21 3.109±0.98 2.868±0.93 3.338±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065U CIL_00065U_0002 CGP 19:47033619-47083479
CIL_0001HK CIL_0001HK_0003 CGP 19:47067748-47090625

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005634 IDA nucleus
GO:0005669 ISO transcription factor TFIID complex
GO:0006352 IEA DNA-templated transcription, initiation
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0015629 IEA actin cytoskeleton
GO:0016573 IEA histone acetylation
GO:0033276 IEA transcription factor TFTC complex
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044212 IEA transcription regulatory region DNA binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018325 taf5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_coding Danio_rerio
ENSG00000148835 TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa protein_coding Homo_sapiens

Loading