C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma antigen, family D, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025151 Maged1 10090 - X:94535474-94542143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026142 Maged1-001 94535474-94542143 protein_coding
  ENSMUST00000133982 Maged1-004 94540494-94542003 retained_intron
  ENSMUST00000138146 Maged1-007 94535476-94537564 retained_intron
  ENSMUST00000138731 Maged1-006 94536082-94537884 retained_intron
  ENSMUST00000139375 Maged1-003 94535476-94537835 retained_intron
  ENSMUST00000141702 Maged1-005 94537675-94538826 retained_intron
  ENSMUST00000153386 Maged1-002 94535476-94541990 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026142ENSMUST00000153386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026142 149.671±13.95 55.352±13.76 83.522±6.18 256.232±38.69 81.207±29.01 21.376±11.13 47.665±5.05 65.350±8.71 39.803±12.60 63.049±2.19 6.472±0.79 155.737±52.77 272.815±169.25 44.306±6.71
ENSMUST00000153386 23.060±0.70 116.724±28.84 19.198±2.92 56.325±13.00 61.286±4.26 39.773±6.27 N/A N/A 8.005±2.41 18.905±3.57 1.206±0.22 97.847±48.89 47.679±39.64 14.742±2.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0032922 IMP circadian regulation of gene expression
GO:0042752 IMP regulation of circadian rhythm
GO:0043234 IEA protein complex
GO:0043406 IMP positive regulation of MAP kinase activity
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0050680 IEA negative regulation of epithelial cell proliferation
GO:0090190 IMP positive regulation of branching involved in ureteric bud morphogenesis
GO:2001235 IMP positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058212 ndnl2 necdin-like 2 protein_coding Danio_rerio
ENSG00000179222 MAGED1 melanoma antigen family D, 1 protein_coding Homo_sapiens

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