C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanoma antigen, family D, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026142 Maged1-001 ENSMUSG00000025151 10090 - X:94535474-94542143 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026142
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026142 149.671±13.95 55.352±13.76 83.522±6.18 256.232±38.69 81.207±29.01 21.376±11.13 47.665±5.05 65.350±8.71 39.803±12.60 63.049±2.19 6.472±0.79 155.737±52.77 272.815±169.25 44.306±6.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0032922 IMP circadian regulation of gene expression
GO:0042752 IMP regulation of circadian rhythm
GO:0043234 IEA protein complex
GO:0043406 IMP positive regulation of MAP kinase activity
GO:0045892 IMP negative regulation of transcription, DNA-templated
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0050680 IEA negative regulation of epithelial cell proliferation
GO:0090190 IMP positive regulation of branching involved in ureteric bud morphogenesis
GO:2001235 IMP positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326587 MAGED1-001 protein_coding Homo_sapiens 0 2983
ENST00000375695 MAGED1-003 protein_coding Homo_sapiens 0 2778
ENST00000375722 MAGED1-005 protein_coding Homo_sapiens 0 3070
ENST00000375772 MAGED1-002 protein_coding Homo_sapiens 0 2850
ENST00000470461 MAGED1-008 processed_transcript Homo_sapiens 0 512
ENST00000473931 MAGED1-011 processed_transcript Homo_sapiens 0 767
ENST00000482188 MAGED1-009 processed_transcript Homo_sapiens 0 446
ENST00000482599 MAGED1-010 processed_transcript Homo_sapiens 4e-32 141
ENST00000485420 MAGED1-006 processed_transcript Homo_sapiens 0 1746
ENST00000494718 MAGED1-004 processed_transcript Homo_sapiens 0 1376

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