C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sideroflexin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025212 Sfxn3 10090 + 19:45047576-45056383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062213 Sfxn3-201 45047576-45056383 protein_coding
  ENSMUST00000084493 Sfxn3-202 45047576-45056383 protein_coding
  ENSMUST00000111954 Sfxn3-203 45047576-45056383 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062213ENSMUST00000084493ENSMUST00000111954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062213 19.334±7.49 19.801±6.58 21.356±0.48 24.056±13.21 18.344±6.24 15.027±0.98 5.231±0.84 9.117±0.98 1.247±0.85 34.519±2.52 7.565±0.89 30.653±10.05 2.600±1.89 6.077±4.00
ENSMUST00000084493 N/A 4.282±0.00 N/A N/A 9.646±0.00 N/A N/A N/A N/A N/A N/A N/A 0.208±0.00 N/A
ENSMUST00000111954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BD CIL_0008BD_0002 VISTA 19:44496521-45098014
CIL_0007U1 CIL_0007U1_0002 VISTA 19:44501251-45102539
CIL_000940 CIL_000940_0002 VISTA 19:44925545-45526320
CIL_0005NG CIL_0005NG_0002 CGP 19:45026906-45056383
CIL_0007ZR CIL_0007ZR_0002 VISTA 19:45042853-45643685
CIL_0005NF CIL_0005NF_0002 CGP 19:45047576-45079289

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 ISA mitochondrion
GO:0008150 ND biological_process
GO:0008324 IEA cation transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055072 IEA iron ion homeostasis
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057374 sfxn3 sideroflexin 3 protein_coding Danio_rerio
ENSG00000107819 SFXN3 sideroflexin 3 protein_coding Homo_sapiens

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