C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DNA primase, p49 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025395 Prim1 10090 + 10:128015168-128030037 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026461 Prim1-001 128015172-128030037 protein_coding
  ENSMUST00000133285 Prim1-002 128015196-128029865 retained_intron
  ENSMUST00000135580 Prim1-003 128019956-128022121 retained_intron
  ENSMUST00000138330 Prim1-004 128026687-128030033 retained_intron
  ENSMUST00000178041 Prim1-201 128015168-128029983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026461ENSMUST00000133285ENSMUST00000135580ENSMUST00000178041
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026461 1.331±0.91 N/A 1.888±0.28 8.775±6.14 0.522±0.00 1.434±0.41 N/A 1.604±0.51 15.060±16.19 0.942±0.11 0.327±0.10 3.764±1.90 7.668±6.53 1.591±0.80
ENSMUST00000133285 0.729±0.57 0.434±0.23 0.513±0.04 1.906±0.66 0.677±0.26 0.704±0.39 0.176±0.08 0.302±0.05 2.006±1.89 0.530±0.29 0.047±0.01 1.714±0.66 1.448±0.24 0.241±0.00
ENSMUST00000135580 N/A N/A N/A N/A N/A N/A N/A N/A 0.406±0.11 N/A N/A N/A N/A N/A
ENSMUST00000178041 1.165±0.00 0.186±0.00 N/A N/A 0.858±0.44 1.321±0.00 0.518±0.13 0.991±0.44 0.954±0.14 0.562±0.11 0.214±0.00 1.244±0.02 N/A 0.749±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003896 IEA DNA primase activity
GO:0005515 IPI protein binding
GO:0006269 IEA DNA replication, synthesis of RNA primer
GO:0016020 IEA membrane
GO:0046872 IEA metal ion binding
GO:1990077 IEA primosome complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040163 prim1 primase polypeptide 1 protein_coding Danio_rerio
ENSG00000198056 PRIM1 primase, DNA, polypeptide 1 (49kDa) protein_coding Homo_sapiens

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