C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA primase, p49 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026461 Prim1-001 ENSMUSG00000025395 10090 + 10:128015172-128030037 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026461
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026461 1.331±0.91 1.888±0.28 8.775±6.14 0.522±0.00 1.434±0.41 1.604±0.51 15.060±16.19 0.942±0.11 0.327±0.10 3.764±1.90 7.668±6.53 1.591±0.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003896 IEA DNA primase activity
GO:0005515 IPI protein binding
GO:0006269 IEA DNA replication, synthesis of RNA primer
GO:0016020 IEA membrane
GO:0046872 IEA metal ion binding
GO:1990077 IEA primosome complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338193 PRIM1-002 protein_coding Homo_sapiens 0 1465
ENST00000439523 RP11-551G24.2-001 processed_pseudogene Homo_sapiens 0 994
ENST00000546761 PRIM1-009 processed_transcript Homo_sapiens 0 350
ENST00000548173 PRIM1-005 retained_intron Homo_sapiens 0 508
ENST00000549549 PRIM1-008 protein_coding Homo_sapiens 0 350
ENST00000550224 PRIM1-004 retained_intron Homo_sapiens 0 821
ENST00000550770 PRIM1-007 protein_coding Homo_sapiens 0 1123
ENST00000552408 PRIM1-006 processed_transcript Homo_sapiens 0 381
ENST00000552590 PRIM1-001 nonsense_mediated_decay Homo_sapiens 0 1456

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