C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA primase, p49 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133285 Prim1-002 ENSMUSG00000025395 10090 + 10:128015196-128029865 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133285 0.729±0.57 0.434±0.23 0.513±0.04 1.906±0.66 0.677±0.26 0.704±0.39 0.176±0.08 0.302±0.05 2.006±1.89 0.530±0.29 0.047±0.01 1.714±0.66 1.448±0.24 0.241±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337227 RBBP9-001 protein_coding Homo_sapiens 0.00007 55
ENST00000338193 PRIM1-002 protein_coding Homo_sapiens 0 835
ENST00000439523 RP11-551G24.2-001 processed_pseudogene Homo_sapiens 0 630
ENST00000546761 PRIM1-009 processed_transcript Homo_sapiens 0 350
ENST00000548173 PRIM1-005 retained_intron Homo_sapiens 0 508
ENST00000549549 PRIM1-008 protein_coding Homo_sapiens 4e-34 148
ENST00000550224 PRIM1-004 retained_intron Homo_sapiens 0 841
ENST00000550770 PRIM1-007 protein_coding Homo_sapiens 0 798
ENST00000552408 PRIM1-006 processed_transcript Homo_sapiens 0 381
ENST00000552590 PRIM1-001 nonsense_mediated_decay Homo_sapiens 0 826
ENST00000611416 CYP20A1-201 protein_coding Homo_sapiens 0.00000009 66

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