C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: R3H domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025404 R3hdm2 10090 + 10:127380327-127499384 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064793 R3hdm2-003 127420867-127499349 protein_coding
  ENSMUST00000077046 R3hdm2-201 127390311-127499383 protein_coding
  ENSMUST00000105249 R3hdm2-006 127444311-127499384 protein_coding
  ENSMUST00000105250 R3hdm2-202 127390311-127499383 protein_coding
  ENSMUST00000105251 R3hdm2-005 127444311-127499367 protein_coding
  ENSMUST00000111628 R3hdm2-010 127380799-127444332 protein_coding
  ENSMUST00000163794 R3hdm2-013 127459491-127465312 retained_intron
  ENSMUST00000164161 R3hdm2-008 127444311-127498709 nonsense_mediated_decay
  ENSMUST00000164469 R3hdm2-014 127481314-127484544 retained_intron
  ENSMUST00000164831 R3hdm2-002 127444311-127498709 protein_coding
  ENSMUST00000165440 R3hdm2-019 127459465-127465182 protein_coding
  ENSMUST00000166820 R3hdm2-001 127380662-127499360 protein_coding
  ENSMUST00000168079 R3hdm2-017 127485482-127495143 protein_coding
  ENSMUST00000168268 R3hdm2-015 127485291-127492724 retained_intron
  ENSMUST00000168780 R3hdm2-012 127421232-127452779 protein_coding
  ENSMUST00000169888 R3hdm2-004 127459495-127499383 protein_coding
  ENSMUST00000170164 R3hdm2-009 127380327-127444391 protein_coding
  ENSMUST00000170336 R3hdm2-007 127421124-127499031 protein_coding
  ENSMUST00000171426 R3hdm2-016 127492657-127499367 protein_coding
  ENSMUST00000171434 R3hdm2-011 127420338-127452014 protein_coding
  ENSMUST00000171823 R3hdm2-018 127459535-127484153 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077046ENSMUST00000105249ENSMUST00000105250ENSMUST00000105251ENSMUST00000164161ENSMUST00000164831ENSMUST00000165440ENSMUST00000166820ENSMUST00000168780ENSMUST00000169888ENSMUST00000171434
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077046 N/A N/A N/A 10.259±0.00 N/A N/A N/A N/A N/A N/A 10.156±2.70 N/A N/A N/A
ENSMUST00000105249 N/A N/A 3.605±2.56 12.758±0.00 N/A N/A N/A N/A 3.567±1.47 N/A N/A 23.545±8.52 7.490±3.18 3.112±0.00
ENSMUST00000105250 N/A N/A 3.161±2.40 N/A N/A N/A N/A N/A N/A N/A N/A 8.613±1.70 4.271±1.81 N/A
ENSMUST00000105251 N/A N/A 1.472±0.56 7.787±1.85 N/A N/A 7.410±1.83 N/A N/A N/A 8.701±1.21 N/A 4.101±0.00 N/A
ENSMUST00000164161 4.062±0.98 31.245±5.16 N/A 4.871±0.00 10.065±2.95 10.410±4.12 N/A 5.418±0.88 4.546±1.69 7.667±2.70 N/A 18.075±3.66 N/A 4.105±1.03
ENSMUST00000164831 3.786±0.39 10.068±2.48 N/A N/A 5.660±1.23 7.306±2.65 3.168±0.00 6.996±1.82 5.914±2.39 9.913±2.92 N/A 9.649±3.55 N/A 4.705±1.01
ENSMUST00000165440 N/A N/A N/A 251.667±0.00 N/A N/A N/A N/A N/A N/A N/A 136.310±0.00 60.392±0.00 89.827±0.00
ENSMUST00000166820 N/A N/A 0.776±0.00 N/A N/A N/A 2.857±0.00 N/A N/A N/A 4.446±0.86 N/A 1.379±0.00 N/A
ENSMUST00000168780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 60.951±0.00 N/A N/A
ENSMUST00000169888 7.736±1.73 7.314±1.50 5.589±1.90 9.372±1.24 6.744±2.67 8.048±2.39 8.829±3.34 17.327±2.36 8.089±3.65 9.690±0.66 N/A 9.882±3.52 3.713±0.12 8.608±0.46
ENSMUST00000171434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 78.790±10.22 151.562±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000179912 R3HDM2 R3H domain containing 2 protein_coding Homo_sapiens

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