C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: R3H domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179912 R3HDM2 9606 - 12:57253762-57431005 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000347140 R3HDM2-001 57253764-57431005 protein_coding
  ENST00000358907 R3HDM2-201 57253765-57310463 protein_coding
  ENST00000393811 R3HDM2-005 57253762-57297033 retained_intron
  ENST00000402412 R3HDM2-003 57253765-57431005 protein_coding
  ENST00000403821 R3HDM2-007 57254756-57341482 protein_coding
  ENST00000429355 R3HDM2-004 57254733-57295479 protein_coding
  ENST00000441731 R3HDM2-202 57253765-57310463 protein_coding
  ENST00000448732 R3HDM2-002 57310340-57430790 protein_coding
  ENST00000466401 R3HDM2-006 57267285-57280452 processed_transcript
  ENST00000546843 R3HDM2-008 57258080-57268577 processed_transcript
  ENST00000547019 R3HDM2-014 57280461-57295594 retained_intron
  ENST00000547262 R3HDM2-013 57280430-57299436 protein_coding
  ENST00000548161 R3HDM2-009 57256014-57268457 protein_coding
  ENST00000551465 R3HDM2-012 57298004-57310451 retained_intron
  ENST00000552428 R3HDM2-011 57297763-57300181 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000358907ENST00000393811ENST00000402412ENST00000429355ENST00000441731ENST00000466401ENST00000547262ENST00000551465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000358907 4.452±0.00 3.945±0.00 N/A N/A N/A N/A N/A 4.191±0.00 N/A N/A 3.182±1.13 3.712±0.00 6.461±0.00
ENST00000393811 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.095±0.00 11.992±0.00 3.847±0.00 N/A
ENST00000402412 12.922±0.00 5.906±0.00 2.657±0.00 5.554±0.00 7.265±2.79 5.707±1.97 4.875±3.03 4.059±2.61 3.273±0.00 9.063±0.00 6.937±5.12 4.497±0.47 9.548±1.53
ENST00000429355 9.491±0.00 N/A N/A N/A N/A 7.527±0.00 N/A N/A N/A 7.777±0.00 8.648±0.00 N/A N/A
ENST00000441731 N/A N/A N/A 8.543±2.67 N/A N/A 3.347±0.00 N/A N/A N/A N/A N/A N/A
ENST00000466401 N/A N/A 17.436±0.00 N/A N/A N/A N/A 12.966±0.00 19.444±0.00 N/A N/A N/A N/A
ENST00000547262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.762±0.00 9.499±0.00 23.787±0.00
ENST00000551465 N/A N/A N/A N/A N/A N/A N/A 7.638±0.00 N/A N/A 4.876±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025404 R3hdm2 R3H domain containing 2 protein_coding Mus_musculus

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