C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105249 R3hdm2-006 ENSMUSG00000025404 10090 + 10:127444311-127499384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000105249
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000105249 3.605±2.56 12.758±0.00 3.567±1.47 23.545±8.52 7.490±3.18 3.112±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264160 R3HDM1-001 protein_coding Homo_sapiens 5e-17 95
ENST00000347140 R3HDM2-001 protein_coding Homo_sapiens 0 2784
ENST00000358907 R3HDM2-201 protein_coding Homo_sapiens 0 2784
ENST00000393811 R3HDM2-005 retained_intron Homo_sapiens 0 2785
ENST00000401880 R3HDM2P2-001 processed_pseudogene Homo_sapiens 0 1705
ENST00000402412 R3HDM2-003 protein_coding Homo_sapiens 0 4146
ENST00000403821 R3HDM2-007 protein_coding Homo_sapiens 0 2226
ENST00000409478 R3HDM1-004 protein_coding Homo_sapiens 5e-17 95
ENST00000409606 R3HDM1-006 protein_coding Homo_sapiens 4e-17 95
ENST00000410054 R3HDM1-005 protein_coding Homo_sapiens 5e-17 95
ENST00000425804 R3HDM1-015 protein_coding Homo_sapiens 6e-18 95
ENST00000429355 R3HDM2-004 protein_coding Homo_sapiens 0 3009
ENST00000429703 R3HDM1-007 protein_coding Homo_sapiens 4e-17 95
ENST00000441731 R3HDM2-202 protein_coding Homo_sapiens 0 2237
ENST00000441871 R3HDM1-014 protein_coding Homo_sapiens 6e-18 95
ENST00000443537 R3HDM1-013 processed_transcript Homo_sapiens 7e-18 95
ENST00000466401 R3HDM2-006 processed_transcript Homo_sapiens 0 586
ENST00000486532 R3HDM1-018 processed_transcript Homo_sapiens 7e-18 95
ENST00000505381 R3HDM2P1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000546843 R3HDM2-008 processed_transcript Homo_sapiens 0 468
ENST00000547019 R3HDM2-014 retained_intron Homo_sapiens 0 603
ENST00000547262 R3HDM2-013 protein_coding Homo_sapiens 0 734
ENST00000548161 R3HDM2-009 protein_coding Homo_sapiens 0 911
ENST00000548184 RP11-123K3.4-001 nonsense_mediated_decay Homo_sapiens 0 2337
ENST00000551465 R3HDM2-012 retained_intron Homo_sapiens 0 693
ENST00000552428 R3HDM2-011 processed_transcript Homo_sapiens 0 431

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