C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 165
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025427 Rnf165 10090 - 18:77456110-77565147 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026494 Rnf165-003 77456110-77565136 protein_coding
  ENSMUST00000182024 Rnf165-005 77458685-77565147 protein_coding
  ENSMUST00000182146 Rnf165-002 77563132-77565105 protein_coding
  ENSMUST00000182153 Rnf165-004 77466737-77565050 protein_coding
  ENSMUST00000182294 Rnf165-007 77562093-77564609 retained_intron
  ENSMUST00000182348 Rnf165-006 77468321-77505117 processed_transcript
  ENSMUST00000182805 Rnf165-008 77462893-77467148 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026494ENSMUST00000182024ENSMUST00000182153ENSMUST00000182294ENSMUST00000182348ENSMUST00000182805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026494 0.260±0.04 0.682±0.09 0.055±0.00 8.047±5.39 0.321±0.12 0.103±0.04 0.057±0.03 0.071±0.04 0.055±0.03 0.116±0.01 0.041±0.02 0.222±0.12 0.081±0.07 0.116±0.05
ENSMUST00000182024 0.065±0.01 N/A N/A N/A N/A 0.066±0.03 N/A N/A N/A N/A 0.039±0.01 0.087±0.04 0.115±0.07 0.090±0.07
ENSMUST00000182153 0.426±0.00 1.362±0.55 N/A N/A 0.846±0.34 0.228±0.00 0.187±0.04 N/A 0.155±0.01 0.298±0.11 N/A 1.067±0.28 N/A N/A
ENSMUST00000182294 N/A N/A 0.186±0.00 8.630±0.42 0.061±0.00 N/A N/A N/A 0.060±0.00 N/A 0.021±0.00 N/A N/A 0.093±0.01
ENSMUST00000182348 N/A 0.744±0.00 N/A N/A N/A 0.253±0.10 N/A N/A 0.063±0.00 N/A N/A N/A N/A 0.438±0.26
ENSMUST00000182805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.437±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P8 CIL_0001P8_0002 CGP 18:77456110-77714010

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077906 rnf165a ring finger protein 165a protein_coding Danio_rerio
ENSDARG00000078817 rnf165b ring finger protein 165b protein_coding Danio_rerio
ENSG00000141622 RNF165 ring finger protein 165 protein_coding Homo_sapiens

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