C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 165
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026494 Rnf165-003 ENSMUSG00000025427 10090 - 18:77456110-77565136 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026494
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026494 0.260±0.04 0.682±0.09 0.055±0.00 8.047±5.39 0.321±0.12 0.103±0.04 0.057±0.03 0.071±0.04 0.055±0.03 0.116±0.01 0.041±0.02 0.222±0.12 0.081±0.07 0.116±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P8 CIL_0001P8_0002 CGP 18:77456110-77714010

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109989 rnf165b-201 protein_coding Danio_rerio 0.00000006 66
ENST00000269439 RNF165-001 protein_coding Homo_sapiens 0 2178
ENST00000543885 RNF165-201 protein_coding Homo_sapiens 0 1369
ENST00000586604 RNF165-002 nonsense_mediated_decay Homo_sapiens 0 1369
ENST00000587853 RNF165-006 protein_coding Homo_sapiens 7e-37 159
ENST00000588679 RNF165-008 protein_coding Homo_sapiens 8e-38 163
ENST00000590330 RNF165-007 protein_coding Homo_sapiens 4e-37 159
ENST00000592777 RNF165-004 retained_intron Homo_sapiens 0 593
ENST00000593230 RNF165-003 protein_coding Homo_sapiens 0 918

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